Carya illinoinensis (pecan): 122300606
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Entry
122300606 CDS
T08745
Name
(RefSeq) GTPase-activating protein GYP1-like isoform X1
KO
K20360
TBC1 domain family member 2
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cill04131
]
122300606
Membrane trafficking [BR:
cill04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
122300606
Retrieval pathways
122300606
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
122300606
NCBI-ProteinID:
XP_042967314
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All DBs
Position
2:complement(27045782..27056105)
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AA seq
453 aa
AA seq
DB search
MRNNSHNNEEDQRRKESTIAGLDSRFNQTLRNVRGLLKGRSIPGKILLTRRSDPSLQEPS
TEYERSSSFKDASSSDRMAKAVEEEVQSTSNPNKNINVNQLKTSTSNTNTENTSKEVQKS
AMGARATDSARVMKFTKVLSGTTVILENLRELAWSGVPDYMRPDIWRLLLGYAPPNSDRR
EGVLRRKRLEYLDCVSQCYDIPDGDRSDDEINMLRQIAVDCPRTVPDVSFFQEPQVQKSL
ERILYTWAIRHPASGYVQGINDLATPFLVVFLSEYLEGGMDGWSISNLSPEKVSNMEADC
YWCLSKLLDGMQDHYTFAQPGIQRLLFKLKELVRRIDEPVSRHLEEQGLEFLQFAFRWFN
CLLIREIPFHLVTRLWDTYLAEGNALPDFLVYIFASFLLTWSDKLQQLDFQELVMFLQHL
PTQNWTHPELEMVLSRAFMWHSMFNDSPSHLAN
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgaggaacaacagccataacaacgaagaagatcagcgcaggaaagagagcactatcgcc
ggcttagattcgagattcaaccagaccctcagaaatgttcgagggttgctcaaaggccga
agtattcctggtaaaattttactgactagacgatcagatccaagcttacaagaaccttct
actgagtatgaaaggagctcctcattcaaggatgctagttcaagtgatcgcatggccaag
gcagtagaggaagaagtccagagtacaagcaatccaaataagaacataaatgtcaatcag
ttgaaaacatcaacttcaaatactaatactgaaaatacatccaaagaagttcagaaatct
gctatgggtgctagagctacagattctgcaagggttatgaaattcaccaaggtgctctct
gggacaacagtcatattagagaatttgcgtgagttagcttggagtggagtaccagattat
atgcgacctgatatctggaggcttctcttgggatatgcaccacctaattcagatagaagg
gagggagttctaagaagaaagcgcctcgagtatctcgactgtgtttctcagtgttatgac
attccagatggtgacagatcagacgatgagatcaacatgcttcgccagattgctgttgat
tgtccacgaaccgtgcctgatgtctctttcttccaggaaccgcaagttcagaaatccttg
gagcgcatcctttatacatgggccattcggcatcctgcaagtggatatgttcagggaata
aatgatttagctacaccctttctagttgttttcctgtcagaatacttggaagggggcatg
gatggctggtcaatctctaatttatctcctgaaaaagtctctaacatggaggccgattgc
tattggtgtctgtcaaaattgcttgatgggatgcaagaccattacacatttgctcaacca
ggaatccaaaggctgttgtttaaactgaaggaattggttaggcggattgatgaacctgtt
tcaagacacctggaggagcaaggtctggaatttcttcaatttgctttccgctggttcaac
tgtcttctaatacgtgagatacctttccatcttgtcactcgcctttgggacacgtatctt
gcggaaggaaatgcattgccagatttccttgtgtacatatttgccagttttcttttaacg
tggtcagataagcttcagcagcttgatttccaagaattagtgatgttccttcaacacctt
ccaacacaaaactggactcacccggagcttgagatggtgctttcaagagcattcatgtgg
cacagtatgttcaatgactctcccagccacttagctaattag
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