Carya illinoinensis (pecan): 122300724
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Entry
122300724 CDS
T08745
Name
(RefSeq) protein transport protein SEC23
KO
K14006
protein transport protein SEC23
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122300724
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cill04131
]
122300724
Membrane trafficking [BR:
cill04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
122300724
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
122300724
NCBI-ProteinID:
XP_042967514
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Position
2:complement(29207122..29210995)
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AA seq
793 aa
AA seq
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MDFVELEAIEGLRWSWNSWPASKSECSALVVPLSVMCTPLMQSSELPILPYDPLLCSYCG
AILNPYARLDYASRIWYCPFCYQKNPFPRSYSGIGETNLPAELFPTYSTVEYAPGRKSVS
PVTNPSGPNLNYKHNWSNGLSSSSSLASMVSSSSSSLSMSMSGGDSRGGGSAFVFVVDTC
TAEEELRALKNELLLLVERLPENALVGLVTYDSMVRVHDLGFSECSRVVLFHGDRELSSE
QTQQFLGFNPTKKQHLGKTPVIRKQGFLLPVSECEFSVTTAIEEIHSSPHARLGHRPLRS
TGTAILAALGLLEGCLVNIGSRIMVFSSGPATLGPGIVVDTDLGSAIRTHRDLINGQAPY
YSKSSSFYKRVSHRLSDASIVLDLFAFSLDQIGASELKGPVESSGGFMMLGDSFESSQFR
KCLQHIFDRDEEGNLKMYFDATIEIVTTKDVKICGALGPCVSLRRKNNLVSNNEIGEGST
YIWKLGTLTSKTCFAFFFQVSDEQKVQPGSAFSIQFITRYRYGNTEIRKRVTTAARRWVG
NHSPEIAAGFDQEAAASVMARLAIARAEKCQAREVIRWLDDALICFASKFGDYVQEDPSS
FRLSSNFSLYPQFMYYLRRSQFIDVFNCTPDETAFFRLMLNREGVVGSLIMIQPTLLQYS
FDGPPIPVLLDVRSISPDVILLFDSYFHVVIHYGSKIAQWRKLGYDKDPSHGNLRKLLEA
PELDAEQLVAERVPAPKIIKCDQHGSQARFLLAKLNPSVTHNSTYMQGSDIILTDDLSLE
VFIDHLQALAVQG
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggatttcgttgagttggaggccatcgaaggtctccgctggtcctggaactcatggcca
gcgtctaaatctgaatgctcagctctagtcgtccccctcagcgtcatgtgcacgccattg
atgcaatcctccgagctcccgatcctcccctacgatcctctcctatgctcttactgcggc
gccattttgaacccatacgcccggctcgattacgcgtctcgcatttggtactgcccgttt
tgttaccagaagaacccgtttcctcgatcctattccggtatcggagagaccaatcttccc
gccgaacttttcccgacttacagcacggtggagtatgcccccgggagaaagagcgtgagc
cccgttaccaacccaagtggtccgaatttgaattacaagcataattggtcgaacgggctc
tcgtcgtcatcttcgttggcgtctatggtttcgtcgtcgtcatcgtcgttgtcgatgtcg
atgtcgggcggcgattcgcgagggggaggatctgcgtttgtgttcgttgtggacacctgc
acggccgaggaggagctacgggcgcttaagaacgagttgttgcttttggtggagcggttg
ccggagaatgcgttggtgggattggttacctatgattctatggttcgtgtccatgatctt
ggattttccgagtgctcgagagtcgttttgtttcatggagatcgcgagctttcttcagag
cagacccaacagtttctgggtttcaatcccacaaagaaacagcatcttggaaagacacca
gttatccgaaagcagggatttttgctaccagtgtctgaatgtgaattcagtgtaactact
gcaatagaagagatccattcttcaccgcatgccaggctgggtcatcgccctctaaggtcc
acaggaacagcaatattagctgcacttggacttctggaaggatgcttagtaaatattggc
tctcgtatcatggtcttttcatctggacctgcgactctaggaccagggattgttgtagac
acagatcttgggagtgccatcagaactcatcgagatctgataaatggtcaagcaccttac
tatagtaaatctagcagcttctataagcgagtatcccacaggttatccgatgcatctatt
gttcttgatttgtttgctttttctcttgatcaaattggagcatcagagctaaaaggccct
gttgagagctcaggtggattcatgatgctaggagactcattcgagtcaagccaatttaga
aaatgcttgcagcacatttttgatcgtgatgaagaaggaaacttgaagatgtattttgat
gcaactattgagatagtgaccactaaagatgtcaaaatctgtggagcccttggaccttgt
gtatcccttcggcggaagaacaatttagtgagtaacaatgagattggggagggtagtact
tatatatggaagttgggcacactcactagcaaaacatgctttgcttttttctttcaagtg
agcgatgagcagaaggtccaacctggatctgcattttccatacaatttataacacgatat
cgatatgggaacacagaaataaggaaaagagtgacaactgctgcaagacgatgggttgga
aaccactcaccagaaattgctgctggattcgaccaagaagcagccgcttctgtgatggca
agacttgctattgctcgagcagaaaagtgtcaagcccgggaggttatcagatggctggat
gatgcattgatatgttttgcttctaagtttggtgattatgtccaggaagatccttcttca
ttccgcctttcatccaatttctcactttatccacagttcatgtactacttaagaaggtcc
cagtttattgatgtatttaactgtactcctgatgaaactgctttctttcggctgatgctg
aaccgtgagggggtggttggttcacttatcatgatccaacctacacttctccaatattcc
tttgatgggccacctattccagtcctcttagatgttcgctcgatttctccagacgttatt
ttgctctttgattcttatttccatgttgttattcattatggatctaagattgctcagtgg
aggaagcttggttatgacaaggacccaagccatgggaatttaagaaagctgttggaagct
ccagagcttgatgcagagcagcttgtagcggaaagagttcctgcccctaagattataaaa
tgtgatcagcatggcagtcaggcaaggtttcttctagcaaaattgaatccatccgttact
cataattcgacatacatgcaaggatcagatattattctcactgatgatttgagcttggaa
gtttttatagatcacttgcaagccctggcagtgcagggctga
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