Carya illinoinensis (pecan): 122300821
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Entry
122300821 CDS
T08745
Name
(RefSeq) nuclear pore complex protein NUP160 isoform X1
KO
K14303
nuclear pore complex protein Nup160
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122300821
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cill03019
]
122300821
03036 Chromosome and associated proteins [BR:
cill03036
]
122300821
Messenger RNA biogenesis [BR:
cill03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122300821
Chromosome and associated proteins [BR:
cill03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
122300821
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUP160_helical_2
Beta-prop_Nup120_160
TPR_NUP160_120_M
HEAT_Nup120
TPR_Nup160_C
NUP160_helical
Motif
Other DBs
NCBI-GeneID:
122300821
NCBI-ProteinID:
XP_042967659
LinkDB
All DBs
Position
2:complement(30306969..30348156)
Genome browser
AA seq
1503 aa
AA seq
DB search
MGGRSTLAGMEVPVIGSDSVKWVELSVPSSSSFSSYGTAASPPFAPLTEDYASSSVIKDP
PIYLIWRIHKTLPHALELLELSANKDFPTIGLRITFPEPLSPFAFVCRNQISYSPKHPYV
LYVLTVTGVAYLLKLGNISTYSSSSVFPPDELLEFNIQAFSNHGAITTVAATAGCLVVGF
SDGSVSCFQLGILEQSAPGFVHELQDDSGIGRLWGIISRGRSVGAVQDLFIYEVHGKQLL
FVLHSDGILRVWDCKSYSKIFSHTMSNPGLAGATFRRLWVGQTDNKTSVIPLAILFNQTS
EVSSEMIGVYGLHCNFGDRTVISLDPSVQHMPLEEERCIDVKLTSDKIWILKDTGLVFQS
LFPTVNVEEEQCFALQEEFVADQLFQSREQSLDDLLWITHSVFSSAKDHMVPFVSSIFLR
KLLCPGVYHNISLRATLLDYNRHWTDSEFQSLTADGLRKEILSLIEYEGSTEIPTISYCW
KNFCTRYFHNWCNYNAPCSLHLDSLSGAVGLIRKNSFSLFRGLEDIERLINGSSDELGDL
ASFGLDLFDDDLEYVILSDMLRCVIGVSRRLSKTASAVFFESFVSTSVLSSEEVLPCLLK
ILVTGYGSSVSKIHMSDIGADIAWEKKLADHKTLRKFSIDMLVSLQTLCNKAATWGKVLN
VIESFLKFLVPRKITHNFDAEILSSVNASVLVQAATQISKVMFESALDMLLFLNYLVKIS
GQIHMPHDDISRIQLELVPMIEEIVSEWVIIHFFATTPSQLAAIEDFSSQLSLLQIDSNV
CRRSWDEKLGKCHFTLAFILVLSVQSSSVQHNHLSSKSLPNSLDIMNSMRDFSSWIIWGK
SGESSAFLSHSTELALILLRHGQYDAVEYLLTTVESHLRKEKTSQSIQDTDGRWCILHHL
LGCCLLAQAQSVAHGVVKEKKVNEAVRCFFCASSGKGASQALQSLSDEVGFPHLRFSGAS
DAAWKLHYYQWAMQIFEQYNISEGACQFALAALEQVDESLITKDGNYDRDPLCESAATIK
GRLWANVFKFTLDLNRFYDAYCAIITNPDEESKYICLRRFIIVLYECGAMKILCGGQLPF
IGLSDKVEQELAWKAERSDILVKPNLYKLLYAFEMHRHNWRRAAGYMYLYSTRLRNEAVL
KDYLNTSLVLQERLNGLSAAINALHLVHPAYAWIDPLLEGNTLQNEHFPRKKARTMEEQT
AAGNDILPQRQQSYIDIVKLENEFVLTSAEYLLSLANIRWTFTEVHRAPSDLVDLLVQRN
LYDMSFTVLLRFFRGSALKRELERVFCAMSLKCCPNKVDSSSVRDDLRTQGLLLTSSKNE
VVIHGSANLVPATQQYKGNSEWETLEIYLEKYRCFHAKLPVIVAETLLSADPEIELPLWL
VQMFKDGRRGRTWGMTGKESNPASLFRLYVDYGRYTEATNLLLDYIESFASVRPADIINR
KKPLAVWFPYTAIEHLWCKLEEFISSGRMVDHCDKLKTLLHGALLKHLQLLRVDSDDVPS
AAH
NT seq
4512 nt
NT seq
+upstream
nt +downstream
nt
atgggaggccgttcgacgttggcgggaatggaagttccggtcatcggcagcgactccgtt
aagtgggttgagctgtctgtcccttcttcttcttctttttcctcctacggcactgctgct
tcaccgcctttcgcccctctcaccgaggattacgcctcttcctctgtcattaaagatcct
cctatctatctcatttggagaattcacaagacccttcctcatgctctcgaattactggag
ctctctgctaataaagactttcccacgattggactgcgaataactttcccagaaccgctc
tctccctttgcttttgtctgcagaaatcagatttcttactctcccaaacacccttacgtg
ctctatgtattgaccgtcacgggagtcgcttaccttctcaaactcggaaacatttctact
tattcgtccagctccgtcttcccaccagatgagcttttagagtttaatatccaggccttt
tccaatcatggagcgataacaactgtagcagcaacagcaggatgtcttgtagttgggttc
agtgatggatctgttagttgcttccaacttggcatacttgaacaaagtgctcctggtttt
gtacatgagctgcaggatgattcaggaattggccgtttgtggggtatcatctcgagaggt
aggagtgttggggcagtgcaagacttatttatatatgaggtgcatggaaaacaacttcta
tttgtacttcattccgatgggatcttacgagtttgggattgtaaaagttatagcaagatc
tttagtcatacaatgagcaatccaggattggcaggagctacttttagaaggttatgggtg
ggccaaactgacaataagacgagtgtaatcccattggcaattttattcaatcaaacttcg
gaagtgagctcggagatgatcggtgtatatggtctgcattgtaatttcggtgacaggact
gtaatatcactagatccttctgttcaacatatgcctttggaggaggagagatgcattgat
gtcaaacttacctcagacaagatatggatactgaaagataccggattggtatttcaaagt
ttgtttccaactgttaatgtggaagaagagcaatgttttgctttgcaggaagaatttgtt
gctgatcagctatttcaaagtcgtgaacaatctttggatgaccttctttggataacgcat
tcagttttttcatctgcaaaggatcatatggtgccatttgtgtcttcaattttcttacgc
aagctgctttgccctggggtttatcataatatttctttgcgtgcaactttactggattac
aataggcactggactgattcagaattccagtccttaactgctgatggattgagaaaggaa
attctttcacttattgaatatgagggttcgacggaaattccaacaatatcttactgctgg
aaaaatttctgtacacgatacttccataactggtgcaattacaatgcaccatgcagtttg
catcttgactctttatcaggtgctgttggtttaatcagaaagaattcattctctcttttc
cgtggtttggaggatattgagcggcttatcaatggttcttctgatgagcttggtgatctt
gcaagctttgggttggatttatttgatgatgatcttgaatatgtgattcttagtgatatg
ctcagatgtgttattggcgtcagtcgacgattgagcaaaactgcttctgctgtatttttt
gagtcgtttgttagtacatcagttttatcgtctgaagaagttcttccttgcctactgaag
attcttgtaactggatatggttcatcagtatcgaagatccatatgtcagatattggagct
gatattgcttgggagaagaaactggcagaccacaaaactcttcggaaattctctattgac
atgctggtatcgcttcaaacattgtgcaataaagctgccacttggggcaaagttttgaat
gtcatagagagctttctaaaatttcttgtacctcgcaaaatcacacataattttgatgct
gaaatattatcaagtgtaaatgcctccgtcttggtccaggctgctactcaaatttcgaag
gtgatgtttgagtctgcactggatatgcttctgtttctgaattatctggtaaaaatcagt
gggcagatccatatgccacatgatgatatatctagaatacaacttgagctggtcccaatg
atagaggaaattgtttctgaatgggtcatcattcatttctttgctaccacaccatctcaa
cttgctgcaattgaagacttcagttctcagctttcattgctacaaattgacagcaacgtg
tgtagaagatcatgggatgagaaacttggaaaatgtcacttcaccttggcttttatcctc
gtactaagtgttcaaagttcctcagtacagcataatcacctttcttcaaaaagtctccct
aattcgcttgatattatgaattcaatgcgagactttagtagctggatcatttggggcaag
tctggagaatcttctgctttcttgagccattctactgagcttgcactaatcctgcttagg
catggccaatatgatgctgttgagtatctactcacaactgtggagtcacatttaagaaaa
gagaagacatctcaaagtattcaagacaccgatggccgatggtgcatacttcatcatctt
ctaggatgttgcctccttgctcaggcacaatctgtggcacatggggtggtgaaagagaag
aaagtcaatgaagctgttcgatgtttcttctgtgcttcatctggaaaaggcgcttcccag
gctttgcagagtctgtctgatgaagtaggatttccacatcttcgtttctctggtgcatca
gatgctgcgtggaagttacattactaccagtgggcaatgcagatatttgagcagtataat
attagcgaaggggcttgccagtttgcacttgctgcacttgaacaagtcgatgaatctcta
attactaaagatggcaattatgatagagatccgttgtgtgaatcggctgccactattaaa
ggacgactttgggctaatgtctttaagtttactttagatctcaatcgcttttatgatgca
tactgtgcaataattacaaatccagatgaggagagcaaatacatctgcctgaggcgtttc
ataatcgttctttatgaatgcggtgcaatgaagattctttgtggtggtcaactacccttc
attggcttaagtgataaagtggaacaagagcttgcctggaaggcagagcgttctgatatt
ttggtgaagccgaacttatataagttgctatatgcatttgaaatgcatcgacataactgg
cgaagagcagccggctacatgtacctatattcaactcgtttgagaaatgaagcagttctg
aaagattacctgaacacttccctggtgctgcaagagaggctgaatgggctctctgctgct
atcaacgcgttgcatcttgttcatcctgcatatgcttggattgatcctttgcttgaggga
aacactcttcaaaacgagcattttcctcgtaaaaaggctagaacaatggaggaacagaca
gcagccggcaatgatattctgcctcaaaggcagcagtcttatattgatatcgtgaaactt
gaaaatgagtttgtgctaacgtcagccgaatatttgctttcattggcaaacatcagatgg
acatttactgaagttcatagagctccatcggatttggttgatcttctagtccagagaaat
ttatacgatatgtcttttacagttctcttaagattcttcaggggttcagcattaaaaagg
gaattggaaagagttttttgtgctatgtctttgaaatgctgtccaaacaaagtagattct
tcatctgttcgggatgatctcaggacacagggtcttttgttgacgtcatcaaagaatgaa
gtggttattcatggttcagccaatctggttccggcaactcaacaatataaggggaatagt
gaatgggaaactcttgagatttatctggaaaaatataggtgttttcatgccaagttacca
gtaattgttgctgaaactcttctttctgcagatcctgagattgaattgcctctttggctg
gttcaaatgtttaaggatggtcgacgagggaggacatgggggatgactggtaaagaatca
aatcctgcatccttgtttcggctctatgttgattatggtcgatatacagaggctacaaat
ctgttacttgattacatagaatcatttgcatcagtgaggccagcggatataatcaatcgg
aaaaaacctcttgcagtttggtttccatacacagcaattgagcacctttggtgcaaactt
gaggaatttatcagttctggtcgcatggtagaccattgtgataagctcaaaacgctctta
catggagcattgctgaagcatcttcagctgctaagggtggattcagatgatgtgccttct
gctgcccattag
DBGET
integrated database retrieval system
