Carya illinoinensis (pecan): 122300829
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Entry
122300829 CDS
T08745
Name
(RefSeq) protein transport protein Sec24-like At4g32640
KO
K14007
protein transport protein SEC24
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122300829
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cill04131
]
122300829
Membrane trafficking [BR:
cill04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
122300829
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
122300829
NCBI-ProteinID:
XP_042967672
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Position
2
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AA seq
1100 aa
AA seq
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MAALVPPGAPRPSNGNNNTSQPPPHNYNPNSNPNSLADNLNSLNLNRPPSMLNSASRASP
FGQPPHFPSSAPPPGVPVASPQFARPGPPPGALGRSIVPPTGPPQSTLPPNVAPPARPTG
PPIGQPSPFGSRTLPGSFPSSVGTNMPPPPGAFQSSGLPSRPVVLAPPPGTRPITGSPPL
TTSQRFPHSSAPSGYVSNGPPAFMSGTLQGGPRFPPAGNAPQPPIGPPPTLGLAGAAPQT
ASMRSLLASSTVAGPHSPTVQPASPFSARPQGVPHPPGPYGSPAWPMQTGQVGPSQPTGS
VQPPRMFGMPPPPLPNQSMTTIPALGQTGAPVSGTSKIDPNQIPRPIPSSSAILFETRHG
NQANPPPPATSDYIVRDTGNCSPRYMRCTISQIPCTADLLTTSGMQLALLIQPMALSHPS
EEPVQIVDFGDIGPVRCSRCKAYINPFMKFIDQGRRFICNICGYTDETPRDYHCNLGPDG
RRRDADERPELCRGTVEFVATKEYMVRDPMPAVYFFLIDVSMNAIQTGATAAACSAISQV
ISDLPEGPRTMVGIATFDSTIHFYNLKRALQQPLMLIVPDVQDVYTPLQTDVVVPLSESR
QHLELLLESIPTMFHNNRTAESAFGAAVQAAFLAIKSSGGKLLVFQSVLPSTGIGSLSAR
EAEGRTNISAGEKESHKVLQPADKTLKTMAIEFAEYQVCVDVFITTQTYIDIASISVIPR
TTGGQVYYYYPFSAVSDPAKLYNDLRWNITRPQGFEAVMRVRCSQGIQVQEYHGNFCKRI
PTDVDLPGIDCDKTIMVTLKHDDKLQDGSECSFQCALLYTTFYGQRRIRVTTLSLPCTNM
LSNLFRSADLDTQFACFLKQAASKIPSTPLLQVREQVTNLCINVLLSYRKFCATVTSSGQ
LILPEALKLLPLYTIALMKSTGLRNDVRIDDRSIWINCVSYLSTPLAIPLVYPRMVAIHD
LDSKDEDESLVPPVIPLSSEYINDQGIYLLENGVDCLIYVGNAVDSNILQQLFGISSAEE
ISTQFVLQQYDNPLSRKVNDLVNEIRRQRCSYLRLKLCRKGDPSGASFLSYMVEDKNPIG
PSYVEFLVHVHREIQIKMTS
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atggcagctcttgtgcctcccggggcacctaggcccagcaatggtaacaataacacatcc
caacctccaccacataactacaaccctaattcaaatcccaattcgctagcagataatttg
aatagtttgaatctcaatcggccaccttccatgctgaattcggcctctagggcttctccc
tttggccagccacctcattttccttcatcagctcctccgcctggggttcctgttgcgtcc
ccacaattcgcccggcctggtccaccacccggtgcacttggaagatccatagtgcctcca
acaggacccccacagtctacattgcctcccaatgtggccccaccagcaagacccacaggg
ccacccatcggccagccttcaccttttgggtcaagaactcttcctgggtctttcccatcg
tcagtgggcactaatatgccacctcctcctggtgctttccaatcttcaggtttgccaagc
cgtccagttgttttggcaccaccaccgggtacccgcccaatcactggctctcctcctttg
acaactagtcagagatttccccattcaagtgcaccgagtggttatgtgagtaatgggcca
ccagcattcatgtcagggactttacagggtggacctcggtttcctcctgctggcaatgca
ccgcaaccacctattggacctccaccgacattggggttggctggggctgctcctcagact
gcaagcatgcgttctcttctggctagttcaactgttgctggtcctcacagtcctactgta
cagccagcatcaccattttcagcacgtccgcagggtgttccgcatcctccaggtccttac
gggtcaccagcatggccaatgcagactgggcaagtgggtccatctcaacctactggttca
gtgcaaccgcccaggatgtttggaatgccaccaccacctcttccaaatcaatctatgact
accatacctgcactgggtcaaactggagccccggtctcagggacatcgaagattgaccct
aatcaaattccaaggcccattccgagttcctccgctatcttgttcgaaacccgtcatggc
aatcaggccaatcctcctccacctgctacaagtgattacattgtcagagacacagggaat
tgcagtccacgttacatgaggtgcaccatcagtcagattccatgtactgctgaccttttg
acaacatcagggatgcagttggcgttgttgatccaacctatggccctttctcatccatct
gaggagcctgtccaaattgtagattttggggatattggtcctgttcgatgttctcgctgc
aaagcctacataaatcctttcatgaagttcattgatcagggaaggcggttcatctgtaac
atttgtggatatactgatgagactccccgtgactaccactgcaacctgggtccagatggt
aggcgcagagatgctgatgaaaggcctgagctatgtagaggaacagttgaatttgttgct
accaaggaatacatggtgcgcgatcccatgccagccgtttatttctttctcattgatgta
tccatgaatgccatacaaactggtgcaactgctgcagcttgcagtgcaatcagtcaagtt
atttctgatcttccagaaggtcctcgaacgatggttggaattgcaacatttgactccact
atccatttttacaatttgaaacgtgcactgcaacagccactaatgctaattgttcctgat
gtccaagatgtttatactcccctgcagactgatgttgttgttccgctctctgagagccgt
caacatttagagctattgctggaaagcatcccaaccatgtttcataacaatagaactgct
gaatcagcctttggtgctgcagtccaggctgctttcttggcaataaagagtagcggagga
aaacttttggtatttcaatcagtcttgccatcaactggcattggatcgctttctgctaga
gaggctgaagggcggactaatatttctgcaggggagaaggagtcccacaaagtactccaa
ccagcagacaaaactttaaagacaatggcaattgaatttgctgagtatcaggtctgtgtt
gatgtatttattactacccagacttatatagacatcgcttctatctctgtcataccaaga
actactggaggacaggtttattattattacccattctcggctgtttctgatcctgcaaag
ctttacaatgatcttagatggaatatcacaaggcctcaaggttttgaggcagtgatgcgt
gtgagatgcagccagggtattcaagttcaagaataccatggaaacttttgcaaacgcatc
ccgacagatgttgacctacctgggattgactgtgacaaaactataatggtaacattaaaa
catgatgataagttgcaggatggctcagaatgctcttttcagtgtgcccttctttacacc
actttctatggccaaagacgaattcgagtcacaactttatctctcccttgcaccaatatg
ctaagtaatcttttccgctcagctgacttggacactcaatttgcatgtttcttgaaacaa
gcggcaagtaaaattccttccactccactcttgcaagtccgggaacaagtgacaaatctt
tgcatcaacgttctgctttcatatcgtaaattttgtgctacagtaacatcgtctggacag
cttattcttcctgaggcacttaaactcctgcctctatacaccattgcattaatgaaaagc
acaggactgcgaaatgatgtgagaatagatgataggtctatttggatcaactgtgtatcc
tacctctctactcctttggcaattccactggtgtatcccaggatggtggctatccatgac
cttgactcaaaggatgaggatgaatctcttgttcctcctgtgattccactttctagtgag
tatattaacgatcagggaatttatcttcttgagaatggtgtggactgtttgatatatgtt
gggaatgccgtggattcaaatatcttgcaacaactgtttggcatctcctcagctgaagaa
atctctactcagtttgtgttgcagcaatatgacaatccactatcacggaaggtaaatgat
ttggtaaacgaaatacggcggcaaagatgttcctacctccgcttaaaattgtgcaggaaa
ggagatccgtcaggagcatcgttcctctcctatatggtagaagataagaatccaattggc
ccctcatatgtcgagttcctagtccatgtccaccgggaaatccaaattaaaatgacatct
tga
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