Carya illinoinensis (pecan): 122301048
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Entry
122301048 CDS
T08745
Name
(RefSeq) uncharacterized protein LOC122301048 isoform X1
KO
K17925
sorting nexin-13
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cill04990
]
122301048
Domain-containing proteins not elsewhere classified [BR:
cill04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
122301048
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
UPF0181
Motif
Other DBs
NCBI-GeneID:
122301048
NCBI-ProteinID:
XP_042968049
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Position
2:32828111..32835643
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AA seq
1103 aa
AA seq
DB search
MSSQRHQVTARELFGEGKKPFVVLAICVAGLSYLMSLTSPSIWVNLPAAASLIIGLRYIS
LDFDMRRKAAAYNSNPSSANTLPPKIPLELPKNVEKSEWRSKVNSPVVEDAIDHFTRHLV
SEWVTDFWYSRLTPDKEGPEELLNIMNGVLGEISARIRNINLIDLLTRDLINLVCIHLEL
FRATQVKIEKQHSGLLTIEHREIELRRILANENKLHPALFSPEAEHQVLQHLMDGLISFT
FKPEDLQCLLFRYIARELLASAVMRPVLNLASPRFMNERIESLVLNMSKAKKGALTVEGA
SQTRSDEPSRISSDHFSRFLDPTVTGVELVPLKNNQSRTTTNASLTDHVNGNKDALLSLD
PQSTRSWDSLPFNFQTCDERGIQRHCSGGELGDTLDLISCRKDQALTPEHFENTRTNGKD
YRKKEGENRVIEQVSQAGKSVKVDHSRAISKSKENNTVTKVNHSDSTAVHFGCTDQLSVE
SSSCPTNRNISSHSSFISFEEDEKHNTTHLEEVESGSSTSYTSEDEESSNVTGLDSPGTK
VWDGRGNRNLALSHIHHPLENSEGLMAKKTGKGHIHYRRLARTPSGLKRSRLSSHKTHIW
QEVERTSFLSGDGQDLLSSAKGYANAEDSSDDCENENLGRVQSGAAASSSVLPIPESHSF
TVSSLQDTLAVASFFKLRLVHLLLQVLGANIVKSGSKTFAVYSISVADVDNNSWSIKRRF
RHFEELHRRLKYFPEYNLHLPPKHFLSTGLDVPIIQERCKLLDKYLKNLMQLPRISGSIE
VWDFLSVDSQTYLFSNSFSIIETLSVDLEDKPSEKSKKLPKFLGPTIVREDLGIENKESM
FPMKNNFVTDGGSNAKDTRQQNYASSPSSLENTVKGRDDNGSSELLHDAAADPFLPTEWV
PTNLSVPILDLVDVIFQLQDGGWIRRKAFWVAKQILQLGMGDAFDDWLIEKIQLLRKGSV
IASGIRQVEKILWPDGIFITKHPKHRPPPPVNPSQNTTIDQQRSGISPPILTYEQQQEAV
RRAKFVYELMIDNAPAAIIGLVGRKEYEQCAKDLYFFIQSPVCLKQLAFDLFEVLLLSAF
PELDYVFKQLQEERHKFVESEGN
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atgagctcgcagaggcatcaggtgacggctcgggaactcttcggggagggcaagaagccg
tttgtggtcctggccatatgcgtcgccggattgtcatacctcatgtccttgacaagcccc
tcaatttgggtcaacttgcctgctgccgcctccttaattattggcttgcgttatatatct
ttggatttcgacatgcggagaaaagctgcagcatacaacagcaatccatcctcagcaaat
actcttcctccaaagattcctcttgaattacctaaaaatgttgaaaagtctgaatggaga
agcaaagtgaattctcctgttgttgaggatgcaatagatcacttcacaagacatctggtt
tctgagtgggttacagatttctggtactctcgcttgacacctgataaagagggtccggag
gaactgttgaacatcatgaatggggttcttggggaaatttctgcacgcattaggaatata
aatttaattgatctactgacaagggaccttattaatcttgtttgcattcacttggagctt
tttcgtgcaactcaagtgaagattgaaaagcaacattcaggattgctaacaatcgaacac
cgagaaatagaactaagacgcatcctggctaatgagaacaaattgcacccagctctgttt
tcgcctgaagctgagcaccaggttttgcagcatctgatggatggtcttatttcttttaca
ttcaagcctgaagatctgcagtgccttctcttccgttatatagccagagagcttctagct
agtgcagtaatgcgacctgtcctaaacctagcaagtccgaggtttatgaatgaaagaatt
gagtccttagtccttaatatgagcaaagcaaaaaagggagctttgacagtagaaggggca
tctcagactagatcagatgagccttcaaggatttcatctgaccatttttctagattcttg
gatcctactgttactggtgttgaacttgtgccgttaaaaaataatcagtctagaaccact
actaatgcatcattaacagatcatgtgaatggaaataaagatgcactgctttcccttgat
cctcaatcaacccgttcatgggactcattgcccttcaacttccaaacatgtgatgagaga
ggtattcagcggcattgctcaggaggagaattgggagacacgttagatctgatttcctgc
agaaaggatcaagcccttactcctgaacattttgagaacacgaggacaaatgggaaagac
tatagaaagaaggaaggtgaaaatcgggtaattgagcaagtatcacaagcagggaagtct
gttaaagtggatcattcaagggcaatatccaaatcgaaagagaacaacactgtaaccaag
gttaatcactctgatagtactgctgttcactttggatgtactgatcagctttctgtagaa
agctcatcatgccctacaaatcggaacatatcaagtcactcttcatttatttcatttgaa
gaagatgaaaagcacaacaccacgcatttggaggaggttgaatcagggagcagtacttct
tatacgtcagaagatgaagaaagtagcaacgtaacaggccttgattctcctggaactaaa
gtatgggatggtagaggtaacagaaatctggctctttctcacattcatcacccacttgag
aattctgaaggccttatggcaaagaagactggtaaagggcatattcactatcgaagatta
gctagaaccccatccggtcttaaaaggtctagactaagcagtcataaaacacacatttgg
caggaggttgagagaacaagcttcttgtctggtgatggacaggatttacttagttctgcc
aaaggatatgcaaatgctgaggactctagcgatgactgtgagaatgaaaatttgggtaga
gttcaaagtggagcagctgcttcttcatctgtgcttcctataccagaaagtcatagtttt
actgtcagttctctgcaagatacgctggcggtggcttcattttttaagttgagattagtt
catttgctgttgcaggtattgggtgcaaacattgtgaagagtggctcaaaaacatttgct
gtttattcaatatctgttgcagatgtagataataacagttggtcaatcaaaagaaggttt
cgtcactttgaggagcttcatcggcgtttgaaatattttccagagtataatcttcatttg
ccaccaaagcattttctatcaacaggtttagacgtacctatcattcaagaaaggtgtaaa
ttgcttgacaagtatttaaagaatctcatgcagcttccaagaatttcaggatcaattgaa
gtttgggattttctcagtgttgactcccagacttatctattctcaaattccttttctata
attgaaactttgtcagttgacctagaggataagccatcagaaaagagtaaaaagcttcca
aagtttcttggacctacgattgtgagagaagatttgggcattgaaaataaggagtccatg
ttcccgatgaagaataattttgtgacagatgggggatcaaatgcaaaagatactaggcaa
caaaactatgcatcttctccctcaagcttggagaacactgtaaaaggaagagatgataat
ggttcatctgagttgcttcatgatgctgctgctgacccattccttcctacagagtgggtg
ccaacaaatttaagtgtccccatattagatttggtagatgtcatcttccaacttcaagat
ggtggatggatcaggcgaaaggcattttgggtggccaaacagatactacaactaggaatg
ggtgatgcctttgatgattggttaatagagaaaatccagcttctgcgtaagggatctgtt
attgcttcagggatcaggcaggttgagaagattctctggcctgatggaatattcataacc
aagcatcctaagcatcgaccaccgccacctgttaacccatcccagaatacaactattgac
caacaacgctcagggatatctccacctatactcacctatgagcaacaacaggaggcagtt
cggcgtgcaaagtttgtttatgagctaatgattgacaatgctccggctgccatcataggt
cttgttggtcgtaaagagtatgaacagtgtgcaaaggatctctatttctttattcagtca
cccgtttgtttgaagcaactcgcttttgaccttttcgaggtgctgcttttgtctgcattt
ccggagttagattatgttttcaagcagttgcaagaagaacgacataaatttgttgaatct
gagggaaattaa
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