KEGG   Carya illinoinensis (pecan): 122301058
Entry
122301058         CDS       T08745                                 
Name
(RefSeq) ras-related protein RHN1-like isoform X1
  KO
K07887  Ras-related protein Rab-5A
Organism
cill  Carya illinoinensis (pecan)
Pathway
cill04144  Endocytosis
cill04145  Phagosome
cill04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:cill00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    122301058
   04145 Phagosome
    122301058
   04148 Efferocytosis
    122301058
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cill04131]
    122301058
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cill04147]
    122301058
   04031 GTP-binding proteins [BR:cill04031]
    122301058
Membrane trafficking [BR:cill04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    122301058
 Endosome - Lysosome transport
    122301058
Exosome [BR:cill04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   122301058
  Exosomal proteins of other body fluids (saliva and urine)
   122301058
  Exosomal proteins of colorectal cancer cells
   122301058
  Exosomal proteins of bladder cancer cells
   122301058
GTP-binding proteins [BR:cill04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    122301058
SSDB
Motif
Pfam: Ras Roc Arf RsgA_GTPase GTP_EFTU MMR_HSR1 Gtr1_RagA TsaE AAA_16 AAA_24 DUF2533
Other DBs
NCBI-GeneID: 122301058
NCBI-ProteinID: XP_042968064
LinkDB
Position
2:complement(32888545..32891986)
AA seq 200 aa
MARPGNKIIQAKLVLVGDMGTGKTSLVLKFVKGQFFDNLEPTIGAAFFTQVLSLAEATVK
FDIWDTAGQERYHSLAPMYYRGAAAAVVVYDISSMDTFTRAKKWVQELQRQGSQNLVMAL
VANKSDLDAKREVAIEEGEQFSQENGMFFTETSAKTSQNINELFFEIAKRLARAAPSKRS
GMTINNETRDRRRKLFCCSG
NT seq 603 nt   +upstreamnt  +downstreamnt
atggccaggccgggaaacaagattatacaagccaagctggttcttgtaggagacatgggg
actggaaagaccagcttggtcttgaaatttgtcaaaggccagtttttcgataacctggaa
ccaacaattggagctgcttttttcactcaggtactgtccttagctgaagccacagtgaag
tttgatatatgggatacagcaggacaagagcgatatcatagcttggctcctatgtattat
cgtggtgctgcagcagctgtagtggtgtatgacatatcaagcatggatacattcactcga
gccaaaaaatgggttcaagaactgcaaagacaaggaagtcagaatttggtgatggcattg
gttgcaaacaagtctgatttggatgcaaagagagaggttgctattgaggaaggtgagcaa
ttttctcaagaaaatgggatgtttttcactgaaacatctgcaaaaacttcacagaatatt
aacgaactcttctttgaaatagcaaaaagactggcaagagcagccccctcgaagcggagt
gggatgactataaacaacgaaacacgagatagaagaagaaaactattttgttgttcaggt
tga

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