Carya illinoinensis (pecan): 122301066
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Entry
122301066 CDS
T08745
Name
(RefSeq) coatomer subunit beta'-1
KO
K17302
coatomer subunit beta'
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cill04131
]
122301066
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cill04147
]
122301066
Membrane trafficking [BR:
cill04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
122301066
Exosome [BR:
cill04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
122301066
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_HPS5
NBCH_WD40
Beta-prop_WDR19_1st
PEP5_VPS11_N
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_WDR75_2nd
TPR_1
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
TPR_2
Beta-prop_Nup120_160
TPR_8
WD40_like
WD_LRWD1
TPR_12
TPR_CcmH_CycH
HEAT_GCN1
ANAPC3
Motif
Other DBs
NCBI-GeneID:
122301066
NCBI-ProteinID:
XP_042968077
LinkDB
All DBs
Position
2:32956487..32968566
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AA seq
909 aa
AA seq
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MPLRLEIKRKLAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQSQTTAKSFEVTELPV
RSAKFIARKQWVVAGADDMFIRVYNYNTMDKIKVFEAHTDYIRCVAVHPTLPYVLSSSDD
MLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT
LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE
LPIIITGSEDGTVRIWHSTTYRLENTLNYGLERVWAIGYMKGSRRVVIGYDEGSIMVKLG
REEPVASMDNSGKIIWAKHNEIQTVNIKSVGADLEVADGERLPLAVKELGTCDLYPQSLK
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEIVWSSDGEYAVRENTSKIKIFSKNFQ
EKRSVRPTFSAEHIYGGALLAMCSNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVAI
ASDTSFYILKYSRDVVSSYFDSGRPVDEQGVEDAFELLHEVNERVRTGIWVGDCFIYNNS
SWRLNYCVGGEVTTMFHLDRPMYLLGYLAGQSRVYLIDKEFNVIGYTLLVSLIEYKTLVM
RGDLERANEVLPSIPKEHHNSVARFLESRGMIEDALEVATDPDYRFELAIQLGRLEAAKS
IASEVQSESKWKQLGELAMSTGKLEMAEECLKRAMDLSGLLLLYSSLGNAEGISELASLA
KEQGKNNVAFLCLFMLGKLEECLQLLLESSNRIPEAALMARSYLPSKVSEIVAIWRKDLN
KVNPKAAESLADPEEYPNLFEDWQVALSVESRVAETRGVYPPAHEYVNHADRSHHTLVEA
FRNMQVDDEEPLENGDTNHESGEEQNVEEHNGEEESQEEAVVVDADSTDGAVLVNGNEAE
EEWVLTSHQ
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcagactggaaattaagagaaagcttgctcaaagatcagagagagtaaagtct
gtggatctgcatcctaccgaaccatggattcttgctagtttgtattcaggaaccgtgtgt
atctggaactaccaatcacagaccacagcgaagtcttttgaggttacagaattaccagtt
aggtctgccaagtttatagcacgcaagcaatgggttgttgctggagctgatgacatgttt
attcgtgtatacaattacaacacaatggataagataaaagtatttgaggcacacaccgac
tacattagatgtgtagctgtccatcctacccttccgtatgtgctgtcatcatctgatgat
atgcttataaagctttgggattgggagaaaggttggatgtgtactcagatttttgagggg
cattcccattatgttatgcaagtgacatttaatccaaaagacaccaacacatttgccagt
gcatctcttgatcgcaccataaagatttggaatcttggctcccccgacccaaattttaca
ttggatgcccatcaaaaaggtgtcaattgtgttgactactttacgggtggtgataaacct
tatctgattactggttctgatgatcacactgccaaggtgtgggattatcagaccaaaagc
tgtgtccagacattagaaggccacacgcacaatgtctctgcagtttgttttcatccagaa
cttcctataataataactggttctgaagatgggacagttcgcatatggcattctaccacg
tataggcttgagaacacattgaattatggtcttgaaagagtttgggctattggatatatg
aaaggttcacgtcgggttgtgattggttatgatgaaggatctattatggtgaagcttggt
cgagaagaacctgttgctagcatggacaacagtggaaagatcatatgggcgaagcataat
gaaattcaaactgtgaacattaagagtgtgggagcagatttggaggttgctgatggagaa
agactgcctttggccgttaaggagttgggaacctgtgatctttacccacagagcttgaag
cacaaccctaatgggaggtttgttgttgtctgtggagatggtgagtacattatctataca
gctttggcgtggagaaacagatcatttggttcggctttggaaattgtttggtcttcagat
ggagaatatgctgttagagagaacacatcaaagattaagattttcagcaaaaatttccag
gaaaagaggagtgtgcgaccaacattctcagctgagcatatttatggaggagctttattg
gcaatgtgctcaaatgattttatttgtttctatgattgggctgaatgcaggttgattcga
cggattgatgttaatgtgaaaaacctctattgggccgatagtggagatttggtggccatt
gccagtgatacatcattctacatcctgaaatacagtcgagatgtagtttcttcttatttc
gatagtggaagacctgttgatgaacaaggtgttgaggatgcctttgaacttcttcatgaa
gtgaatgaacgcgtcaggactggtatatgggttggggattgtttcatttataacaactcc
tcctggaggcttaattactgtgttggtggtgaggtaaccacaatgtttcatttggaccgg
cctatgtatttgttgggttatcttgctggtcaaagtcgggtgtatctaattgacaaagag
ttcaatgttataggatacacattacttgttagcttgatcgagtataagacacttgtaatg
cgtggagacctggaaagggcgaatgaagttttaccatcaattcctaaagagcatcataat
agtgtggctcgtttcttggaatcacgtggaatgatcgaggatgctcttgaagtagctacg
gaccctgattatagatttgagctagctatacagcttggaagattagaggctgcaaagagc
attgcctcggaagtgcagagtgagtctaaatggaagcagttgggagaattagcaatgtcc
actggaaagttagaaatggctgaggaatgtttaaagcgtgcaatggatttgagtggttta
ttgctgctctattcttcattaggcaacgctgaggggatatcagaacttgcatcccttgct
aaagagcaggggaagaacaatgttgcatttctttgcttattcatgttgggtaaattggaa
gagtgcctccagctgttgttggaaagcagcaatcggatacctgaggctgccttgatggca
cgatcttatcttccaagcaaggtctcagagattgtcgcaatttggagaaaggacctcaat
aaggtcaatcctaaagctgctgaatctttagctgatcctgaggagtatcctaatttgttt
gaggattggcaagttgctctctctgtggaatccagagttgcagagactagaggcgtttat
cctcctgcacacgaatatgtcaatcatgctgatagatcacaccacacacttgtggaggct
ttcagaaacatgcaagtggatgatgaggaaccccttgaaaatggagacacaaatcatgag
agtggagaggaacagaatgtagaggaacacaatggagaagaagaaagccaagaggaggct
gtcgtagtggatgctgattcaacagatggtgcagtactcgttaacggtaacgaggctgaa
gaagagtgggtacttacgtcacaccagtag
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