Carya illinoinensis (pecan): 122301268
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Entry
122301268 CDS
T08745
Name
(RefSeq) probable pectate lyase 18
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00040
Pentose and glucuronate interconversions
cill01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122301268
Enzymes [BR:
cill01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
122301268
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
122301268
NCBI-ProteinID:
XP_042968427
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Position
2:34617575..34622914
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AA seq
502 aa
AA seq
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MPLPTTCILFICFFLSSPSFLTKATLNLTLPHQHPDPEAVVQEVQRSVNVSLSRRQMLSL
QGKGQRSTCLTGNPIDDCWRCDSNWQKNRQRFADCAIGFGRNALGGKGGQIYIVTDSSDR
DPANPVPGTLRHAVVQEEPLWIVFAADMTIQLKHELIVNSYKTIDGRGANVHIVGNGCIT
LQYVSNVIIHNIHVHHCKPSGNTNIRSSPTHVGWRGKSDGDGISISGARLIWIDHCSLSY
CTDGLIDAIMGSTGITISNNYFSHHNDVMLLGHNDRYALDSGMQITIAFNHFGDALVQRM
PRCRRGYIHVVNNDFTQWEMYAIGGSANPTINSQGNRYNAPPDQNAKEVTKRVDTDQNEW
TSWNWRSEGDIMVNGAFFVPSGAGLGPQYAMASSVEPKAAGLIDQLTMNAGVLGGPRESS
QGMSYPGYNGGGASTGTTYSGNSGSGGDGDNFGMIFGGGAMAAAPPAAPSSTSIILPLAI
ILIWHTTTDLHLLLSFPLLLAL
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgccgcttccaaccacctgcattctattcatatgtttcttcttaagctctccgtccttc
ctcaccaaagctaccctcaatctcacactccctcaccaacaccccgaccctgaagctgtt
gttcaagaagttcaaaggagcgtcaatgtctctctctcccggagacaaatgctctctcta
caaggaaagggccaacgttccacatgcctcaccggcaaccccatcgacgattgttggcgc
tgcgattcaaactggcaaaaaaaccgccaaaggttcgccgactgcgccattggattcgga
cgtaacgccctcggtggtaaaggaggtcagatctacatagtcaccgactcgtcggaccgt
gacccggctaatccggtccccggtacccttcgccacgccgtggtccaagaagaacctctc
tggattgtattcgctgcggacatgaccatacagctgaaacacgagctgatagtcaatagc
tacaagacgatcgacggtcgcggtgcgaacgtccacatcgtgggtaacgggtgcatcacg
ctgcagtacgtgtctaacgtcatcatccacaacatccacgttcaccactgcaagccatcg
gggaacacgaatatacggtcatctccgacgcacgtcgggtggagggggaaatcggacggc
gacgggatatccatatccggagcgcgactgatctggatcgatcactgctccttgtcgtac
tgcacggacggcttgatcgacgcgataatggggtcgacgggaatcaccatctccaacaac
tatttctcgcaccacaacgacgtgatgctgctgggccacaacgatcgctacgccttggac
tcgggcatgcagatcaccatagcgttcaatcatttcggcgacgcgctggtgcagcgtatg
cctcggtgcagacgggggtacatacacgtcgtcaacaacgattttacgcagtgggagatg
tatgccatcgggggtagtgctaaccccaccattaatagtcagggtaatcggtataatgct
ccgccggaccaaaacgccaaggaggtgacgaagcgcgtggacacagaccagaatgagtgg
acgtcctggaactggaggtcggagggggacataatggtaaatggggcgttctttgtgcca
tcaggggcaggcctcggcccccagtacgccatggcctccagtgtggagcccaaggccgct
gggctaatcgaccagctcactatgaacgctggtgttcttggtgggcccagggagagcagt
cagggcatgtcatacccaggatacaatggtggtggggccagcacgggaaccacctacagt
ggaaattctggatccggtggtgatggagacaactttggaatgatatttgggggcggcgcc
atggcagccgcaccacctgcagccccatcttctacttcaatcattttaccccttgcaatt
attttaatttggcacactaccacagatcttcatctcctattatcgtttcccttattattg
gcattatga
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