Carya illinoinensis (pecan): 122301280
Help
Entry
122301280 CDS
T08745
Name
(RefSeq) exocyst complex component SEC8-like
KO
K06111
exocyst complex component 4
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cill04131
]
122301280
Membrane trafficking [BR:
cill04131
]
Exocytosis
Tethering complex
Exocyst complex
122301280
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec8_N
Vps54_N
EXOC6_Sec15_N
Sec8_C
TMF_TATA_bd
DUF5354
Motif
Other DBs
NCBI-GeneID:
122301280
NCBI-ProteinID:
XP_042968449
LinkDB
All DBs
Position
2:34686420..34707494
Genome browser
AA seq
1059 aa
AA seq
DB search
MGIFDGLPVSSGKAYLREELTRIDESWATGRFDSLPHVVHILTSKDREGEVESLKEQSDV
VEEVVNEVVHAYHSGFNKAIQNYSQILRLFGESTESIAVLKVDLAEAKKHLSTRNKQLHQ
LWYRSVTLRHIISLLDQIEGIAKVPARIEKLIADKQFYAAVQLHVQSTLMLEREGLQTVG
ALQDVRSELTKSRGVLFYKVLEDLHVHLYNKGEYSSAASSIHERDDEVPTTTAVVLSVNN
SQSLSRRTRLLKGDNQFGFQTDGSCRPSSVDGGFSFDNHDKEGALEDAASDGNMSSVGVN
GGNGNLKDAKTLPRQTPIWLLNSTPDEFLETIKKSDAPLHVRYLQTMVECLCMLGKVAAA
GAIICQRLRPAIHEIITSKIKAHAELVNSSRSGISQGERNATPGLHFIKEQLESFQFPKQ
KHQNGISLAGTLSAVSPVSPVMAPTGRAQAATRELLDSILDTVVRIFENHVVIGEILESK
STHQIEVNTPRSRPTDWNPDSEASQVTGGYSIGFSLTVLQSECQQFICEILRATPEAASA
DAAVQTARLASKAPSKEKRDRSEDGLTFAFRFTETTISIHNQGGSRRGRNVLQEGYGSAT
VLPEQGIYLAASIYRPVLQFTDKVAAMLPKKYAQLGNDGLLSFVENFVKDHFLPTMFVDY
RKSVQQAISSPAAFRPKAHAASTYTPLVEKGRPVLQGLLAIDFLAKEVLGWAQAMPKFAG
DLVKYVQTFLERTYERCRTSYMEAVLEKQSYMLIGRYDIEKLMRLDPASSCLPNSLGQSN
MDSNAGSVEVELELSDLLLALRPIKQENLIRDDNKLILLASLSDSLEYVADLIERLGQIN
SRASIQIEETPKYHHTRTSSAPTRDLASFADEYRKLAIDCLKVLRVEMQLETIFHMQEMA
TREYLEDLDAEEPDDFIISLTSQIMRRDEAMAPFLECPKRNYIFGGICSIAANASIKALA
DMRSINLFGVQQICRNSIALEQALAAIPSINSEAVQQRLDRVRTYYELLNMPFEALLAFI
VEHEHVFTTAEYANLLKVQVPGRAIPADAQDRVSEIFSH
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atggggatctttgatggtttgccagtgtcttccggcaaagcatatctgagggaagaactt
acaagaatagatgagagttgggccacaggacgctttgattcattacctcatgttgtccat
attttgacatcaaaagatcgtgaaggcgaagttgaatctttgaaggagcaaagtgacgtt
gttgaggaggttgtgaatgaagtggtgcatgcttatcacagtggcttcaacaaagcaatt
caaaactattcccagatcttgaggttgtttggcgaatccactgaaagtatcgctgtctta
aaggttgatttggctgaggcaaagaagcatcttagcacccgcaataagcaattgcatcaa
ttgtggtatcggtcggtaacattgcgtcacataatttccctcttagatcaaattgagggc
atagccaaggttccggctcgtattgaaaagctaattgctgacaagcagttttatgctgca
gttcagttgcatgttcaatcaacattgatgcttgagcgagaggggcttcaaactgttggt
gctcttcaagatgtccggtcagagttgacaaagtcgcgaggagttcttttttacaaggtt
ttggaggatttgcatgtacacctgtacaacaaaggtgaatacagctcagctgcctcaagc
atacatgaaagagatgacgaagtgccaactaccacagctgttgtgttatctgtgaataat
tcacaatctctatctcgaagaaccaggctactgaaaggtgacaaccagtttggtttccaa
acagatggatcatgtaggccgagttctgttgatggagggttctcttttgataaccatgac
aaggagggtgctctggaagatgctgcctcagatgggaatatgtcatcagttggggtcaat
ggtggaaatggtaatctaaaggatgccaaaactcttcctcgccagacaccaatatggctt
ttgaattccactccagatgaatttcttgagacaataaagaagagtgatgctccgcttcat
gtgaggtatttgcaaaccatggttgagtgcctctgcatgcttggcaaggttgcagctgct
ggggctataatatgccaaagattgcgaccggcaattcatgagataatcacatccaagatt
aaagctcatgcagaacttgttaattcttcaaggtctggcatcagtcagggtgagcgaaat
gctactccaggtcttcattttataaaagaacagctagaaagcttccagttccccaaacaa
aagcatcagaacgggatatctctggctgggactctttctgcggttagtcctgtctctcct
gtgatggctcccacaggaagagcacaggcagccacaagggagcttctggattcaattttg
gacacagttgttcgaatatttgagaatcatgtcgtcattggagagattttggaatcaaaa
tccactcatcaaattgaagtgaacactccaaggtcaaggccaacagattggaatcctgat
tctgaagcatctcaagttactgggggctatagcattggcttctccttgactgttttgcag
agtgaatgtcaacaattcatttgtgagattctgcgggctactcccgaagccgcgtctgca
gatgctgccgtacaaacagctagacttgcaagcaaggccccttccaaagaaaagagggac
cggtcagaggatggtcttacctttgcttttcgttttacagaaacaacaatatctattcat
aaccagggggggagtaggaggggtcgcaatgttttgcaagaaggttatggatctgcaaca
gtcttacctgagcaaggcatatatctagctgcatctatatatcgacctgtgcttcagttt
acagataaggttgctgcaatgctgccaaaaaagtatgcccagcttgggaatgacggattg
ctttcatttgtggagaacttcgtgaaggaccactttttaccaactatgtttgtagactac
cggaaaagcgtacagcaagctatatcaagtccagctgcatttcggccaaaggcgcatgct
gcgtccacttatactccattggttgagaagggtagaccagtcttacaagggcttttggct
attgatttcttagcaaaagaggtgcttggttgggctcaagcaatgcctaaatttgctggt
gatcttgtgaagtatgtgcagactttccttgagcgtacatatgagagatgtcgtacttca
tacatggaggcggtgcttgagaagcagagttatatgctcattgggaggtatgatattgag
aaattgatgcgacttgatccagcaagttcttgtttaccaaattcacttggtcagtcaaac
atggatagcaatgctggaagtgttgaggttgaactggaactgagcgatttattgttggct
ttgaggccaattaagcaggagaatctaatccgtgatgataacaaactcattttgctagca
tcccttagtgattcattggagtatgttgcagacttaattgagaggcttggacaaataaac
tcaagagcatcaattcaaatagaggagactcccaagtaccatcatactcgaacaagcagt
gcacctactagggatctggcatcatttgctgatgagtacagaaaattagcaatagattgc
cttaaggttttacgtgtagagatgcagttggagacaattttccatatgcaggaaatggca
actagggaatatttggaggacctagatgctgaagagccagatgacttcattatttcactc
acctctcagataatgcgaagggatgaggcgatggcaccttttcttgaatgtccaaagcgc
aattacatatttggtggaatttgtagcattgctgcgaatgcatctatcaaggctttggct
gatatgagatccattaacctttttggggttcagcagatatgccggaattcgatagcatta
gaacaggcgctggcggctatcccatcaattaacagtgaagctgtgcaacagagattggat
cgtgttcgtacttactacgaacttctaaacatgccatttgaggccttgctagccttcatt
gtggagcatgagcacgtttttacaactgcagagtacgctaatcttctgaaggtccaggtc
ccaggaagagcgattcctgctgatgctcaagatcgcgtatcagagattttctctcattag
DBGET
integrated database retrieval system
