KEGG   Carya illinoinensis (pecan): 122301283
Entry
122301283         CDS       T08745                                 
Name
(RefSeq) ras-related protein RABF1
  KO
K07887  Ras-related protein Rab-5A
Organism
cill  Carya illinoinensis (pecan)
Pathway
cill04144  Endocytosis
cill04145  Phagosome
cill04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:cill00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    122301283
   04145 Phagosome
    122301283
   04148 Efferocytosis
    122301283
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cill04131]
    122301283
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cill04147]
    122301283
   04031 GTP-binding proteins [BR:cill04031]
    122301283
Membrane trafficking [BR:cill04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    122301283
 Endosome - Lysosome transport
    122301283
Exosome [BR:cill04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   122301283
  Exosomal proteins of other body fluids (saliva and urine)
   122301283
  Exosomal proteins of colorectal cancer cells
   122301283
  Exosomal proteins of bladder cancer cells
   122301283
GTP-binding proteins [BR:cill04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    122301283
SSDB
Motif
Pfam: Ras Roc Arf RsgA_GTPase Gtr1_RagA GTP_EFTU MMR_HSR1 AAA_7 TniB AAA_16
Other DBs
NCBI-GeneID: 122301283
NCBI-ProteinID: XP_042968451
LinkDB
Position
2:complement(34721508..34726116)
AA seq 200 aa
MGCSSSIPDRSSGRLTGPNLENGGVADPKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPT
SKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVVVYDITSPES
FAKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPVQDGIDYAEKNGMYFIETSAKTA
DNINQLFEEIAKRLPRPPAS
NT seq 603 nt   +upstreamnt  +downstreamnt
atgggttgctcttcctctatcccagataggagttctgggcggttgaccggcccgaatttg
gagaatggcggagtggccgacccaaaaaatcttcgcgtaaagctggtgttgttaggtgac
tctggagttggcaaaagctgtattgttcttcgctttgttcgtggtcagtttgacccaaca
tccaaggttactgttggagcttcattcttatcacagacaatagctttgcaagattccaca
acggttaagtttgaaatatgggacactgctggacaggagagatatgcagcattggcacca
ctttactatcgaggtgctgcagttgcagtagttgtgtatgatataacaagcccagaatca
tttgccaaagcacaatattgggttaaggagctacaaaagcatggaagtcctgatatagtc
atggccttagttggtaacaaagctgatcttcatgagaagcgggaagtgccggttcaggat
ggcattgactatgcggagaagaatggaatgtattttatcgagacatctgcaaagactgca
gataatataaatcagctgtttgaggaaattgccaagcggctaccccgcccacccgcttca
tga

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