Carya illinoinensis (pecan): 122301320
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Entry
122301320 CDS
T08745
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122301320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cill03019
]
122301320
03016 Transfer RNA biogenesis [BR:
cill03016
]
122301320
03012 Translation factors [BR:
cill03012
]
122301320
04131 Membrane trafficking [BR:
cill04131
]
122301320
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cill04147
]
122301320
Messenger RNA biogenesis [BR:
cill03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
122301320
Transfer RNA biogenesis [BR:
cill03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
122301320
Translation factors [BR:
cill03012
]
Eukaryotic type
Elongation factors
122301320
Membrane trafficking [BR:
cill04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
122301320
Exosome [BR:
cill04147
]
Exosomal proteins
Proteins found in most exosomes
122301320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
SRPRB
FlpD
AAA_22
Motif
Other DBs
NCBI-GeneID:
122301320
NCBI-ProteinID:
XP_042968506
LinkDB
All DBs
Position
2:complement(35100869..35103679)
Genome browser
AA seq
449 aa
AA seq
DB search
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK
VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDLILEPKRPSDKPLRLPLQD
VYKIGGIGTVPVGRVETGIIKPGMVVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNV
KNVAVKDLKRGFVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTCHIAVKF
AELVTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQT
VAVGVIKSVEKKDPSGAKVTKSAAKKGGK
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaggagaaggttcacatcaacattgtggtcattggtcacgtcgactcaggtaag
tcgaccaccaccggccacttgatctacaagcttggaggtattgacaagcgtgttattgag
aggtttgagaaagaagctgctgagatgaacaagagatcattcaagtatgcttgggtgctt
gacaagctcaaggcagagcgtgagcgtggtatcaccattgatattgccttgtggaagttt
gagaccaccaaatactactgcacagtcatcgatgccccaggacaccgcgactttattaag
aacatgattactggaacctcccaggctgattgtgccgttcttattattgactccaccacc
ggtggttttgaagctggtatttccaaggatgggcaaacgcgtgagcatgctctacttgcc
ttcacccttggtgtcaagcaaatgatttgctgttgcaacaagatggatgccacaactcca
aaatactcaaaggcaaggtatgatgaaattgtgaaggaagtctcctcctacctgaagaag
gttgggtacaaccctgataagattccttttgtccccatctctggatttgagggtgacaat
atgattgagaggtccacgaaccttgactggtataagggcccaaccctgcttgatgccctt
gacttgatcctggagcccaagagaccctcggacaagcccctgcgtcttccacttcaggat
gtctacaagattggaggcattggaactgtgcctgtgggtcgtgttgagacaggtattatc
aagcctggtatggtggtgacttttggccccactggattgaccactgaagttaagtctgtt
gaaatgcaccatgaggctctccaagaggcccttcctggtgacaatgttggcttcaatgtg
aagaatgttgcagtcaaggatctcaagcgtgggtttgttgcctcaaactccaaggatgac
ccggccaaggaggcagccaatttcacctcccaagttatcatcatgaaccaccctggccag
attggaaatggctatgccccagtccttgattgccacacctgccacattgctgtcaaattt
gccgagctcgtcaccaagattgacaggcgttctggtaaggagcttgagaaagagcccaag
ttcttgaagaatggtgatgctggatttgttaagatgattcccacaaagcccatggtggtg
gaaacattctccgagtatcctccacttggtcgttttgctgttagggacatgcgtcaaacc
gtggctgtcggtgtcatcaagagcgtagagaagaaggatccttctggagccaaggtgacc
aagtctgcagctaagaaaggtggcaagtga
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