Carya illinoinensis (pecan): 122301361
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Entry
122301361 CDS
T08745
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00040
Pentose and glucuronate interconversions
cill01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122301361
Enzymes [BR:
cill01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
122301361
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
122301361
NCBI-ProteinID:
XP_042968578
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Position
2:35496957..35499676
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AA seq
331 aa
AA seq
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MASLPYAEVDSSLRSLAGRAEGFGRLSVGGLYGPVYCVTTLSDDGPGSLREGCRRKEPFW
IVFEVSGVIHLSSYLSVSSYKTIDGRGQRIKLTGKGLRLKECEHIIICNLEFEGGRGHDV
DGIQIKPNARHIWIDRCSLRDYDDGLIDITRQSTDITISRCYFTRHDKTMLIGADPSHIG
DRCIRVTIHHCFFDGTRQRHPRVRFGKVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEA
GQKKKTFEYYTEKAADMEEAKSGSIRSEGDLFLNGAQACLLTGASEECVFHPSEFYPTWT
MEAPSDSLKDILHICTGWQSIPRPAEQKATA
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccctaccttatgccgaagtggattccagcctgagatcactagcaggtcgtgcc
gagggattcgggcggttatcggtaggaggcctctatgggccggtctattgcgtcaccact
ctctcagatgatggtccgggatcccttcgtgaaggttgccgcagaaaagagccattctgg
attgtttttgaagtttcaggtgtgattcatctttcttcttacttgagtgtatcctcttat
aagacaattgatggtcggggtcaaaggataaagctcacgggcaagggcttaaggctgaaa
gaatgtgaacacataatcatatgcaaccttgagtttgaaggcggtagagggcacgatgtt
gatggtattcaaataaaaccaaatgcaaggcacatatggatagaccgctgcagtcttcgt
gattatgacgatggacttatagacattaccagacaaagcactgatataactatttcaaga
tgttactttactcggcatgacaagacaatgcttatcggggcagacccctctcacattggt
gatagatgcattcgggtgacaattcatcattgttttttcgatgggacacggcaaaggcat
cctcgcgttagatttggaaaagttcatctatacaacaattacaccagaaactggggtata
tatgctgtttgtgccagtgtggaatcccagatatactctcaatgcaacatatatgaagca
ggacagaagaaaaagacttttgaatattatacagagaaggcagcagatatggaagaggca
aagtctggctcaataagatctgagggagacttgtttctgaatggagctcaagcttgctta
ctgacaggggccagtgaagaatgtgtgttccatccaagtgaattttacccgacatggaca
atggaagcaccctcagattctcttaaagatattctccacatttgtacaggttggcaatcc
attcctaggccagcagagcagaaggcaactgcatag
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