Carya illinoinensis (pecan): 122301374
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Entry
122301374 CDS
T08745
Name
(RefSeq) ABC transporter B family member 20-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122301374
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cill02000
]
122301374
04147 Exosome [BR:
cill04147
]
122301374
04090 CD molecules [BR:
cill04090
]
122301374
Enzymes [BR:
cill01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
122301374
Transporters [BR:
cill02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
122301374
Exosome [BR:
cill04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122301374
CD molecules [BR:
cill04090
]
Proteins
122301374
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_15
Zeta_toxin
AAA_21
AAA_23
Motif
Other DBs
NCBI-GeneID:
122301374
NCBI-ProteinID:
XP_042968601
LinkDB
All DBs
Position
2:35590106..35601159
Genome browser
AA seq
1399 aa
AA seq
DB search
MMISRGLFGWSPQHIQPLTPVSEVSEPPESPSPYMDQSMDTAGQQLEPEEEIEDPEDIEL
PPAAVPFSRLFACADYLDWGLMLVGSLAAAAHGTALVVYLHYFAKIIHVLRIGPDRQDEQ
LEKFRELTLTIVYIAVGVFVAGWIEVSCWILTGERQTAVIRSRYVQVLLNQDMSFFDTYG
NNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGVVLGFVNCWQIALITLATGPFIV
AAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNETLAKYSYAASLQATLR
YGILISLVQGLGLGFTYGLAICSCALQLWVGRFLIKQGKAHGGEIITALFAIILSGLGLN
QAATNFYSFEQGRIAAYRLFEMISRSSSTVNQDGITPDSVHGNIEFRNVYFSYLSRPEIP
ILSGFYLTVPSKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIRNLKLEWLRS
QIGLVTQEPALLSLSIRDNIAYGRDATLDQIEEAAKIAHAHTLISSLEKGYETQVGRAGL
ELTEEQKIKLSIARAVLLNPLILLLDEVTGGLDFEAERAVQEALDLLLLGRSTIIIARRL
SLIKNADYIAVMEDGQLVEMGTHDELLTLDGLYAELLKSEEAAKLPRRMPLRNYKETSTF
QIEKDSSASYNFQESSSPKMVKSPSLQRIPGIFRPPDSTFNSQDSPRVGSPPPEKMLENG
QPMDATNKEPSIRRQDSFEMRLPDLPKIDVQSTNRQTSNGSDPESPVSPLLTSDPKNERS
HSQTFSRPHCQSDEFPVKAKEAKNTQHRKAPSFFRLAELSLAEWLYAVLGSIGAAVFGSF
NPLLAYVIALIVTAYYTRDGHHLRREVDRCCLIIACMGIVTVVANFLQHFYFGIMGEKMT
ERVRRMMFSAMLHNEVGWFDEEENSADALSMHLANDATFVRAAFSNRLSIFIQDSAAVIV
AVLIGMLLQWRLALVALATLPVLAVSAIAQKLWLAGFSRGIQEMHRKASLVLEDAVRNIY
TVVAFCAGNEVMEQYRFQRKKIFKRSFFHGMAIGFAFGFSQFLLFACNALLLWYTSYSVK
HRYMDLPTAIKEYMVFSFATFALVEPFGLAPYILKRRNSLISVFEIIDRAPKIDPDDNLA
LKPPNVYGSIELKNVDFCYPTRPEVLVLSNFSLKVNGGLTVAVVGISGSGKSAIISLIER
FYDPVAGQVLLDGRDLKLYNLRWLRNHLGLVQQEPIIFSTTIKENIIYARHNASEAEMKE
AARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLIDEASSSIE
SESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLLAKNGL
YVRLMQPHFGKGLRQHRLV
NT seq
4200 nt
NT seq
+upstream
nt +downstream
nt
atgatgatctctagggggctgttcggttggtccccacagcacatacagccattgactccc
gtgtccgaagtttcggagccgccagagtcgccgtctccctatatggaccagagcatggac
acggcggggcagcagctcgagcctgaagaggagattgaggaccccgaggatatcgagctg
ccacccgccgccgtccccttctcacgccttttcgcctgcgccgactatctcgactggggc
ctcatgcttgtcggctcactcgctgccgccgcccacggcactgcccttgtcgtttatctt
cactacttcgccaagataattcacgttctcaggatcggccccgatagacaagatgagcag
ttggaaaagtttagagagcttactttaacaatcgtgtatattgctgtgggcgttttcgtt
gctggttggattgaggtttcatgctggatacttactggggaaaggcagactgctgtcatc
aggtcacgatatgttcaagtgttacttaaccaagacatgagtttttttgatacctatggg
aacaatggggacattgtgagccaagtactgagtgatgtgctgcttattcaatctgctctt
agtgagaaagttggaaattatattcacaatatggctacgtttttcagtggtgttgttctt
ggttttgtcaactgttggcagatcgcactaataacattagccactggtccattcattgta
gctgctggaggaatatcaaatatttttcttcacaggcttgctgagaatatccaagatgca
tatgctgaagcagctagcattgctgaacaggcagtctcctatattaggacattgtatgcc
tttacaaatgaaacgttggcaaagtattcttatgcagcatcactacaagcaactctaaga
tatggtatactaataagccttgtgcaaggacttggtctcggatttacgtatgggcttgca
atatgttcttgtgccttacaactgtgggttggaagattcctgattaaacaaggaaaagct
cacggtggtgaaatcataacggccctatttgctataattttaagtggcctggggctgaat
caagctgcaacaaacttctattcatttgagcaaggacgaattgctgcctatagactgttt
gagatgataagcagatcatcctctacggttaatcaagatggaatcaccccggattcagtt
catggaaatatcgagtttaggaatgtatatttcagctatctgtctcgtcccgaaatccct
attttgagtgggttttatcttaccgtaccttctaagaaagctgtggcacttgttggcaga
aatggctccggaaaaagcagtattatcccactcatggagcggttttatgatcctacatta
ggagaagttctcttggatggggaaaatattaggaacctgaaattggaatggctaagaagc
caaataggtctagtaacccaggagcctgccttgctaagtttgagtataagagacaatatt
gcttacggacgggacgctaccttagatcaaattgaagaagctgctaaaatagcgcatgca
catactttaatcagctcgcttgagaaaggatatgaaacacaggtgggcagagctggttta
gaattaacggaagagcagaaaataaaactgtctattgctagagcagtacttctaaatcca
ttgattcttctgctcgatgaagttactggtggacttgattttgaagctgaaagagctgtt
caggaggctctagatctcctcttgttgggacgttcaactataataatagctcggcgactt
agtcttataaaaaatgctgattacatagctgtgatggaggatggtcaacttgttgaaatg
ggtacgcatgatgaattattgaccctcgacggcctatatgcagagcttctcaaatctgaa
gaagcagcaaaacttcctagaaggatgccattgagaaactataaggagacttcaactttc
caaattgaaaaggattcttcagcaagttacaacttccaagaatcgtcatctcctaaaatg
gtcaaatcaccctctctccagagaattcctggcatattccgtcccccagatagcactttt
aactcacaggattcaccaagagttgggagcccgcctccagagaagatgctggaaaatggt
cagccgatggatgcaaccaataaggaaccatcaataagaaggcaggatagctttgaaatg
agattaccggacctacccaagattgatgttcagtctacaaatcgacaaacgtcaaatggt
tcagaccctgaatcccctgtttcaccccttttgacatctgatcccaaaaatgaacgttca
cattcgcagacttttagccgacctcattgtcaatctgacgaatttccggtgaaagcgaag
gaagcaaaaaatacacagcatcgcaaagcaccatcattttttaggttggcagagcttagt
cttgcagagtggctctatgctgtattaggaagcattggtgctgctgtctttggttctttt
aatcctcttcttgcttatgttattgcactgatagtgacggcatattatacacgggatggt
catcacttgcggcgggaagtagacagatgttgcttgatcattgcctgcatgggtatagtg
acagttgttgccaattttttgcagcacttttactttggtataatgggggagaagatgact
gagcgagttcgtagaatgatgttctcagcaatgttgcacaatgaagttggatggttcgat
gaagaggaaaacagtgctgatgcattatccatgcatttggcaaatgatgctacatttgtg
agagcagcttttagcaaccggctttccatatttatacaggacagtgctgctgttattgtg
gctgttcttattgggatgttgctacagtggcgattggcacttgtggctttggcaaccctt
ccggttctcgctgtttctgccattgcacagaaattgtggcttgctggattttcaaggggc
atccaggagatgcacaggaaggcatctttagtccttgaggatgcagttagaaacatatac
actgttgtagcattctgtgctggtaacgaggtaatggagcagtacaggtttcaacggaag
aaaatatttaagcggagtttctttcatggaatggccatcgggtttgcttttggcttttca
cagtttcttctttttgcctgtaatgcgcttctcctctggtacacctcatactctgttaaa
catcgctatatggacctacccactgctatcaaggaatatatggttttttcttttgcaaca
tttgcactggtggagccttttggattggctccatacatactgaaacgacgaaattctctt
atttcggtctttgaaatcatagatcgagcacctaagattgacccagatgataacttggca
ttgaagccacctaatgtttatggaagcattgagttgaaaaatgttgatttctgttaccct
acacgcccagaagttttggtattgagcaatttcagcctcaaggtcaatgggggactaact
gtggctgtggtgggaatttcagggtctgggaagagtgccataatatctctgatcgagagg
ttttatgatccagttgctggtcaagtcctactggatgggcgagatttgaaactttataat
ttgagatggttgaggaaccacttaggtcttgttcagcaggaaccaattatcttttcgaca
actataaaggaaaatataatatatgcaaggcacaatgctagtgaagcggagatgaaagag
gctgctaggatagcaaatgctcaccatttcatcagcagtttgcctcatggttatgacaca
catgtggggatgaggggtgtagatctgaccccaggccagaaacagaggattgcaattgct
cgggtagtgctaaagaatgcacccattttgttaatagatgaagcaagctcctccatcgag
tctgagtcaagtcgggtggtgcaggaggctcttgatacattgatcatggggaacaaaaca
accattctgatagcccatagagctgcaatgatgaggcatgtagacaacattgtagttctg
aatggggggcgaattgtagaggaagggacccatgattctttgctggcaaagaatggtctg
tatgtgcgcctgatgcaacctcattttgggaagggtttgcgtcagcaccgacttgtttag
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