Carya illinoinensis (pecan): 122301423
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Entry
122301423 CDS
T08745
Name
(RefSeq) pumilio homolog 1-like
KO
K17943
pumilio RNA-binding family
Organism
cill
Carya illinoinensis (pecan)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NABP
PUF
PUF_NOP9
Motif
Other DBs
NCBI-GeneID:
122301423
NCBI-ProteinID:
XP_042968711
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All DBs
Position
2:35979233..35986166
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AA seq
1054 aa
AA seq
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MVTDTYSKMAPDVSVRSVLKNSDYDEDLGVLMREQRRQQEELTDREKELGMYRSGSAPPT
VEGSLSEVGGLFDASVVMGFKKNGGQGLVSEDELRADPMYVNYYHSNVNLNPRLPPPLLS
KEERRFAHRLSDGGAGPAVGGIGDRRRMSRGNEESRNGDGNRSLFSVQPGYGRKEENGKG
TAEWAGDGLIGLPGLGLGSGQKSIAEIIQEDIHTSSVSKHPSRPGSQNAFDNGVGTSESH
FAHLRHELVSMDALHSGGHKQGISGSQNVGASASHTYASALGASLSRSSTPDPQLVARAP
SPHIPPVGGGRASSLDKRNFSGSDSFNGVSPGFNDSTDLVATLSGMNLSANGLGDNSRSE
LQHESDAHRDLFNLEGEKDHIKQHSYLNKSESAHFHLGPHSAKGSYPNMGNSSGVGMDLN
NLLKADKKIELHKPVVSSANSYFKGPSTPTFNGRGSSPSHNQNLENMNSPFQNYGLSGYT
VNPSSPSMMASQLGIANLPPLFENATAASALGLSGMDSRVFGGMSLGPNLLAAADLQNIS
RLTNHTAGSALQVPLMDPLYLQYLRSNEYAAAQVAALNDTAMDRECMGNSYLNIIEAQKA
YLGSLLSPQKSHLGVPYLGKSAGLNHGYYGNPALGLGMSYAGSPLAGPLLPGSPIGSGSP
VRHSERNMRFPGMRSLAGGVMGAWPSEVSGDLDETFAATLLDEFKSNKTKSFELSEIAGH
VVEFSADQYGSRFIQQKLETATAEEKNMVFDEIMPQALSLMTDVFGNYVIQKFFEHGTAS
QIRELADQLNGHVLTLSLQMYGCRVIQKAIEVVDLDQQTKMVKELDGHVMRCVRDQNGNH
VIQKCIERIPEDAIQFIVSTFYDQVVTLSTHPYGCRVIQRILEHCDDAKTQQIMMDEVLR
SVIMLAQDQYGNYVVQHVLEHGKPHERSAIINKLTGQIVQMSQQKFASNVIEKCLSFGTQ
TERQTLVNEMLGSTDENEPLQVMMKDQFANYVVQKVLETCDDQQLELILNRIKVHLNALK
KYTYGKHIVARVEKLVAAGERRISIMNPHPAQMA
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atggtcaccgatacttattcgaagatggcgcccgatgtttcagtgagatcagtgctcaaa
aacagcgattatgacgaggatttgggggtgttgatgagggagcaaagacggcaacaggag
gagttgacagacagagagaaggaactcggtatgtaccgaagtgggtcggccccaccaacc
gtcgagggctcgctgagcgaagttgggggattattcgatgcctcggtggtaatgggtttc
aagaaaaacggtggccaagggctggtgagcgaggatgaacttcgggctgaccccatgtac
gtaaattattaccattcgaatgtgaatctgaacccgcggctgccgccgccgctgctgtcg
aaggaggagaggcggtttgcacatcggttgagtgacggcggcgcgggcccggcggtggga
ggaatcggtgataggaggagaatgagtagaggtaatgaagagagtaggaatggggatggg
aatcggtcgcttttttcggtgcagccagggtatggtagaaaggaggagaatgggaaggga
acagcggagtgggctggcgatgggttaattggcttgcctggtttggggctagggagcggg
cagaagagtattgcggagatcattcaggaggatatacatacatcatctgtctctaagcac
ccatctcgccctggcagccaaaatgcatttgataatggtgttgggacttcagaatcccat
tttgctcatttgcgccatgaattagtgtctatggatgctttgcattctggtgggcataag
caagggatttcagggtcacaaaatgttggtgcatcagcttctcatacatatgcttctgct
ttaggtgcctccttgtcgaggagcagcacacctgaccctcaacttgtggctagggcacca
agtcctcacattccacctgttggaggagggagggctagctcattggataaaagaaatttt
agtggatcagactcattcaatggtgtctcacctggtttcaatgactctactgatcttgtt
gctactttgtctggaatgaacctgtcggcaaatggtttgggagacaattcaaggtcagaa
ctgcaacatgaaagtgatgctcaccgtgacctattcaatttggagggcgagaaggatcat
ataaaacaacattcatacttaaacaagtctgaatctgcccattttcatctgggcccccat
tcagctaaaggatcatatccgaacatgggtaatagcagtggggttgggatggatctgaac
aatttattgaaggctgataagaaaatagaactccataagcctgttgtatcatctgctaac
tcttactttaaaggaccatctacaccaactttcaatggccgaggaagctcaccttctcac
aatcagaatttggaaaatatgaattccccatttcaaaactatggcttgagtgggtatact
gttaatccttcatcaccatcgatgatggctagccagcttgggattgctaatttgccaccg
ttatttgaaaatgctaccgctgcatctgcattgggccttagtggcatggactctagagta
tttggaggtatgtctttaggaccaaatttgttggcagcagcagatttgcagaatattagc
agactgacaaatcacaccgcaggaagtgcccttcaggtgccactgatggacccattgtat
cttcagtacttgagatcaaatgagtatgccgctgcgcaggttgctgcccttaatgacaca
gcaatggatagagaatgtatgggtaattcatacctgaatataattgaagcccagaaagct
tatctggggtcattgctttcacctcagaagtcacacttaggtgttccctaccttggtaaa
tctgctggcttgaatcacggttattacggaaatccagcattaggtcttgggatgtcatat
gctggaagcccattggctggtcctcttcttccaggctcccctattggatcaggtagtcct
gtccggcacagtgagcgaaacatgcgttttcctggcatgaggagtttagctggcggtgtt
atgggtgcttggccgtcagaagtcagcggtgacttggatgaaacttttgcagccacttta
ctagatgagtttaagagcaataaaactaaatcttttgaactttcagaaattgcgggccat
gttgttgagttcagtgccgatcagtatggtagtcgatttattcaacagaaactcgaaact
gccacagcagaagagaaaaacatggtttttgatgaaattatgccccaagcactttcatta
atgactgatgtctttggtaattatgtgattcagaagttttttgagcatggaacagcgtcc
caaataagagaactggctgaccagctcaatggtcatgtgctgacccttagccttcaaatg
tatggctgccgagttatccagaaggctatagaagttgttgatctggatcagcagactaaa
atggtcaaggagctggatggtcatgttatgcgttgcgtacgcgatcaaaatgggaaccat
gtcatccagaaatgtattgaacgcatacctgaagatgccatccagttcattgtttcaaca
ttttatgatcaagttgtgactctttccactcatccatatggctgtcgtgtcatacagaga
atcctggagcattgcgatgatgctaaaacacagcaaataatgatggatgaggttttgagg
tctgttatcatgttggctcaagaccaatatgggaattacgtcgtacagcatgtgctggag
catggcaagccacatgaacgttcggctatcataaataaattaactggtcagattgtccaa
atgagccagcagaaatttgcatccaatgttatcgaaaagtgtttaagctttggaactcaa
accgaacgccagacgctcgttaatgagatgcttggttccactgatgaaaatgagcccctc
caggtgatgatgaaagaccagtttgcaaattatgttgtacagaaagtgttggaaacttgt
gatgaccagcaacttgaactgatacttaaccgaataaaggtccatctgaatgctcttaag
aagtatacatatgggaagcatatagttgcgcgtgtggagaaacttgttgcagctggagaa
aggaggattagcattatgaatccgcatcctgctcagatggcatag
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