Carya illinoinensis (pecan): 122301505
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Entry
122301505 CDS
T08745
Name
(RefSeq) uncharacterized protein LOC122301505 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cill04131
]
122301505
Membrane trafficking [BR:
cill04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
122301505
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
122301505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANAPC4_WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
PEP5_VPS11_N
WD40
Beta-prop_RIG_2nd
WDR55
Synaptobrevin
Beta-prop_IFT140_1st
Lgl_C
TFIIIC_delta
DUF7595
Dor1
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
122301505
NCBI-ProteinID:
XP_042968830
LinkDB
All DBs
Position
2:complement(36712290..36724498)
Genome browser
AA seq
1120 aa
AA seq
DB search
MSSNLATTMFAKLFPEGTAEHHSPQISLTPVDLDPRVTLHYGIPSTASILALDPIQSLLA
IGTLDGRIKVIGGDNIEALLTSPRQLPFKHLQFLQNQGFLASVSNENEIQVWDLEHRQIA
STLQWESNITAFSVIDGTAYMYIGCEYGMVSVLKYDAEGRNITQLPYCVSTNIIAEAAGL
SLEDHLPIAGVLHQPCSQGNRLLIAYQNGVMVLWDASEDCTVLIRGYEDLLLKDKTVVHC
PKDTRHEQPDDVSDDREMDKEISSLCWASNNGSVLAVGYVDGDIMFWNLLNTAATTDQKA
EKSFNNVVKLQLSSGSRRLPIIVLHWAMNRSANDCEGQLFVYGGDEVGSEEVLTILSLDW
SSGIESMKCIGRVDLTLDGFADMVLLPSAGRTANGTMSLVVLTSPGKLHIYDNNCLSALI
SQKEKKASAVALQYHMIIPTLDPYMTVAKLGLVSRDGKFSKVLSEAASAAKLYAAHTPDM
GGTKWPLTGGVPSQLLDSEDYHIERLYIAGYKDGSVRVWDATYPVLSLIYLLGAEVNGIN
IAGTSASISALDFCSETLSLAIGNEYGLVLLYKLMRSSDDTILHFVTETENEVHSMHQGE
GPQCSAVFSLLNSRICTLQFANFGSRLAVGFECGRVAVLDISTQSVLFVTDCVTNSSAPV
ISLAVKTFSDTNVINSPEDSESKISKNLGQELVFVMTSNAHIIVMDSETGNMVSSWSMNP
EKDSAAISMYMIDGRNFIPDVSNKKHSLNSHPKSEDKGESAQSNLQSGSTPHEVQLETSS
ETACFGLQSMSLFFLLCCEDALLLYPLKSMTEGDREPIGKVSFVQRCCWTTTLKKDEKEC
GLVVLYQSGVIEIRSLPTLEVLRETSLMSILRWNFKTNMEKTMFSSHNGQIILVNGCELA
AISILANENDFRIPESLPGLHSKVLQAAVDASIINSPNQKNRQDAAPGLLGGVIKTFKAI
REAHNADLTVAHKNNFSHLESLFSTPPFLKAPAAVTDDQDIVELNIDDIKIDEPMAVSSS
FQKSNNDGRVKGTERERLFEGASTETTPRLRTAEEIKAKYRKAGDASSAAAHARDKLVER
KEKLERLSQRTEELQSGAENFASMASELAKTMERRKWWNI
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgaatttggccaccaccatgtttgctaagttatttccagagggcaccgctgaa
caccattctcctcagataagtttgacaccagtggacttggatccacgtgtaacacttcac
tatgggatcccttctactgcatccatccttgctttggacccaattcaaagcctattggcc
ataggaactctggatggcaggataaaagtgattggtggtgataacattgaagcgcttctt
acatctcctaggcaattgccctttaaacacttgcagttcttacaaaatcaaggttttcta
gccagtgtctcaaatgaaaacgaaattcaggtctgggatttagaacacaggcaaatagct
tctactttacagtgggagtccaatataactgctttctctgtcattgatggcaccgcttac
atgtatataggatgtgagtatgggatggtatctgtgctaaagtatgatgctgaaggcaga
aatattacacaattaccatattgtgtttccacgaatatcatagccgaagcagctgggctg
tcattggaagatcatcttcctattgctggagttctccaccaaccttgttcccagggaaat
agattgctgattgcatatcagaatggggtgatggtgctatgggatgcttcggaagattgc
actgttcttattagaggctatgaggacctcctattgaaggataaaaccgtggttcattgt
ccaaaagacacaagacatgagcagcctgatgatgtatcagacgatagagaaatggacaaa
gagataagctctctttgttgggcatctaataatgggtcggttcttgcagttggctatgta
gatggtgatataatgttttggaacctactaaatactgccgctaccacagatcagaaagct
gaaaaatcatttaacaatgttgttaagttgcaattatcatcaggtagcagaagactccca
atcattgttttacattgggctatgaatagatctgctaatgattgtgaaggccaacttttt
gtatatggcggtgatgaagttggatcagaagaggttttgacgattttgagcctagactgg
tcttctgggattgaaagtatgaaatgcatcggacgtgtagaccttacacttgatggattt
gcggatatggttctattaccaagtgctggtagaacggcgaatggtaccatgtctctagtt
gtattgacaagtcctggaaaactgcatatctacgacaataattgcttgtctgccttaatt
tctcaaaaagagaagaaggcttctgcagttgcattgcagtatcatatgatcatacccact
cttgatccatacatgactgtggcgaagcttggattggtttctagagatgggaagttctca
aaggttctgtctgaggctgcctcagctgcaaaactttatgcagctcacactccagatatg
ggaggtacaaagtggcctctaactggtggtgttcccagtcagcttcttgactctgaagat
tatcacattgagagattatacatagcaggttacaaagatggatctgttcgagtatgggat
gccacatatccagtcttgtcacttatttatcttttaggagctgaggtgaatggcatcaat
attgctggtacaagtgcatcaatatcagcattggatttctgctctgaaactttaagtctt
gccattggcaatgaatatggtctggttctcctttacaaactaatgcgtagttcagatgat
acgattttgcacttcgtgacagaaactgaaaatgaagttcatagcatgcaccaaggggaa
gggcctcaatgctcagctgtattttccctcctcaattctcgtatatgcaccctgcaattt
gcaaattttggatcacgacttgccgtaggatttgaatgtggcagggttgcggtgcttgat
atcagtacacaatcagttttgtttgttacagactgtgtaaccaactcaagtgcccctgtc
atttctcttgctgtgaaaacgttttcagatacaaatgtaataaacagtccagaggactct
gaatccaaaatttcaaaaaatcttggacaggagctggtgtttgtaatgaccagcaatgca
cacatcattgtcatggatagtgagacaggcaatatggttagcagttggtcaatgaaccca
gaaaaggattcagctgccatttctatgtacatgatagacgggaggaatttcatccctgat
gtgtccaataaaaagcattcattgaactcacatccaaaaagtgaagataaaggtgaatct
gcacaaagtaatttgcagtctggaagtacaccacatgaagttcaacttgaaacctcaagc
gaaactgcgtgttttgggttgcaatcaatgagcttattctttttactttgttgtgaagat
gcattgctattataccctttgaagtctatgactgagggtgacagagagccaattgggaag
gtgagttttgtacagcgatgttgttggactacaaccttgaagaaagatgagaaagagtgt
ggactggttgttctctatcagagtggagtcattgagatcaggtctttgccaactcttgaa
gtattgagagaaacaagtttaatgtcaattctaaggtggaacttcaagactaacatggag
aagacaatgttttcttcccataacggccaaattattctggtcaatgggtgcgaacttgct
gcaatatccatattggccaatgaaaatgacttcaggattccggagtccttgcctggtctt
cacagtaaagtcctgcaagctgctgtagatgcctccatcatcaactctccaaatcagaag
aacagacaggatgctgcccctggattgttaggtggtgtgattaagacctttaaagcgatt
agagaggcgcacaatgcagatcttactgtggctcataagaataatttttcacatttagaa
agcttattttcaacccctcctttcttaaaggctcccgcagcagtaacagatgaccaagac
attgtggagctcaacattgatgatatcaaaattgatgaacccatggcagtctcttcttcc
tttcagaagagcaataatgatgggagagttaagggcacggagagagagagattatttgag
ggtgcatctactgagacaacaccaagactgaggacagccgaagaaattaaggctaaatac
agaaaggcgggggatgcctcttcagcagctgcacatgcacgggataagcttgtagagcgg
aaagaaaaacttgagaggctcagtcagagaactgaagagctgcaaagtggggctgagaac
tttgcttcaatggcaagtgaactcgcaaagacgatggaacgtcgtaaatggtggaacata
tga
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