Carya illinoinensis (pecan): 122302223
Help
Entry
122302223 CDS
T08745
Name
(RefSeq) probable alpha-mannosidase At5g13980
KO
K01191
alpha-mannosidase [EC:
3.2.1.24
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
122302223
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cill04131
]
122302223
Enzymes [BR:
cill01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.24 alpha-mannosidase
122302223
Membrane trafficking [BR:
cill04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Selective cargos
122302223
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_38N
Glyco_hydro_38C
Alpha-mann_mid
Laman-like_dom
Glyco_hydro38C2
Motif
Other DBs
NCBI-GeneID:
122302223
NCBI-ProteinID:
XP_042969302
LinkDB
All DBs
Position
3:395643..422629
Genome browser
AA seq
1015 aa
AA seq
DB search
MGILHVFFCVVLLAGILCTESNFIAYNTSQSIVPGKLNVHLVPHTHDDVGWLKTVDQYYV
GSNNSIQGACVQNVLDSMVSALLADKNRKFIYVEQAFFQRWWRDQSETVQDVVKQLVSSG
QLEFINGGMCMHDEAATHYIDMIDQTTLGHRFIKKEFGVVPRIGWQIDPFGHSAVQAYLL
GAEVGFDSLFFGRIDYQDRAKRKNEKSLEVVWQGSKSLGSSAQIFAGAFPENYEPPPGGF
YFEVNDDSPIVQDDINLFDYNVQDRVNDFVAAAVSQANITRTNHIMWTMGTDFKYQYAHT
WFRQMDKLIHYVNKDGRVNALYSTPSIYTDAKYARDESWPIKTEDFFPYADRPNAYWTGY
FTSRPALKRYVRIMSGYYLAARQLEFFKGRSNYGPNTDSLADALAIAQHHDAVSGTEKQH
VANDYAKRLSIGYTKAEELVASSFACLAQSASDTGCGSPTMKFQQCPLLNISYCPASEAD
LSQGQNLIVLAYNALGWKRDDVVQIPVINEDVTVHDFEGREIESQLLPLATAYVGLRNYH
VRAYVGRSPTQTPKYLLAFKVSVPPLGFSTYTISSVKKPGTSSIRSSLYQFQSGEKSSVE
VGQGNLKLTFSTDHGKITNYVNSRSLIEEPVEQSYSYYSGFKGNDKDTQNSGAYIFRPNG
TFPVEPDEQAPLTVMRGPVIEEVHQHINPWIYQITRLQKGKEHVEVEFIVGPIPIDDGVG
KEVATQVTTTMDTDKAFYTDSNGRDFIKRIRDYRADWDLEVNQPVAGNYYPINLGIYLQD
NQSEFSILVDRSIGGSSTVDGQIELMLHRRLVLDDSRGVAEALNETVCVHNKCTGLTIQG
KFYYRFDPLGEGAKWRRTVGQEIYSPLLLAFAEQDGDNWMNSHVASFSGIDSSYSLPDNV
ALVTLQELDDGKVLLRLAHLYEIGEDRDLSVLTHVELKKLFPKKKISKVTETNLSANQER
TEMEKKRLVWKVEGSSREEKITRGGPVDPAKLVVELAPMEIRTFVIDFNSVSMVM
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atgggcatcctccatgtcttcttttgcgttgtccttttagctgggattctatgtacggaa
tccaatttcatcgcttacaatacttctcagagcatagtccccggaaagcttaatgtccat
ttggttcctcacactcacgacgatgttggttggttgaagaccgttgaccagtattacgtt
ggctccaacaattccatccagggggcgtgcgttcagaatgtattggattctatggtgtct
gcgctattggctgacaagaatcgaaagtttatctatgttgagcaggcatttttccaacga
tggtggagagatcagagtgagacagtccaggatgtggttaagcagctggtgagctcaggt
caactggagttcataaatgggggtatgtgcatgcatgatgaagcagcaacacattacatt
gacatgattgatcagacaacccttgggcatcggtttatcaaaaaggagtttggggttgtt
ccaaggattggttggcaaatagatccctttggacattctgcagtacaggcatatttgttg
ggagcagaagttggattcgactcacttttctttggtcgaatagattaccaagacagagct
aagcgcaaaaatgagaaaagtcttgaagttgtctggcagggttccaagagccttggttca
tctgctcagatttttgctggtgcatttcctgaaaattatgagcccccacctggtggtttc
tacttcgaagttaacgatgattcccctatagttcaagatgacattaacttgttcgactac
aatgttcaagaccgagtaaatgactttgttgctgctgcagtatcacaggctaatataact
cgaacaaatcatataatgtggacaatggggacagattttaagtatcagtatgcgcataca
tggttccggcagatggacaaactcattcattatgtcaacaaggatggccgcgtcaatgct
ctgtactctaccccatccatatatactgatgcaaaatatgctagagatgaatcctggcca
atcaagactgaagacttcttcccttatgcagatcgtccaaatgcgtactggacaggatac
tttaccagtaggccagctctcaagcgctatgtcagaataatgagtggctattatttggca
gcaaggcaactggagttttttaaagggaggagtaattatgggcccaacacagactcactt
gcagatgctttagcaattgctcagcatcatgatgcagtttctggtacagaaaagcagcat
gtggctaatgattatgcaaaacgtttgtcaataggatacacgaaggctgaggaattagtt
gcatcttcatttgcttgcttggctcagtctgcatcagatactggatgtgggagcccaacc
atgaagtttcaacagtgcccacttctgaatataagttactgtccggcatcagaagctgat
ctgtctcaaggacagaatttgatagtcttggcctacaatgctcttggatggaagagagat
gatgtagttcaaatcccagttatcaatgaagatgttactgtgcatgactttgagggaaga
gaaattgaatcccagcttcttcctctggccacagcctatgtgggcttaaggaactaccat
gttagggcatatgtaggtcgaagtccaactcagacacccaagtatttgcttgcatttaag
gtgtctgtaccaccacttggtttcagcacgtatactatttccagcgtgaaaaagccaggc
actagttcaatcagatcatctctataccagtttcagagtggtgaaaaatctagtgttgaa
gttggtcaaggaaatttaaagcttactttttccacagatcatggaaaaattactaattac
gttaatagcagaagcttgattgaggaaccagttgaacaatcgtacagttattactctgga
ttcaagggaaatgacaaagacactcagaactcgggggcatatatcttccgaccaaatggt
acatttcccgtagagcctgacgaacaggctccgttgactgttatgcgtggaccagtaata
gaagaagtacatcaacatatcaatccatggatttatcagattaccagactgcaaaagggg
aaagagcatgttgaagttgagtttattgttggacctatacccattgatgatggtgttgga
aaagaagttgcaactcaagttacaactaccatggataccgacaaagcattctacacagat
tctaatgggcgtgactttatcaaaaggattcgtgattatcgagcagattgggacctagaa
gtgaatcaaccagttgctggaaattattatccaattaatcttgggatttacctgcaagat
aatcaatcggaattttcaattttggtggatcgttctattgggggatccagcacagtggat
ggacaaatagagttgatgctccacaggagactggtacttgatgattcaagaggtgttgca
gaggccttaaatgaaacagtctgtgttcataataaatgcacaggactaactatccaagga
aagttttattaccgatttgaccccttgggagagggggctaagtggcgtcgtactgttggc
caggagatatattctccacttcttctagcatttgccgaacaggatggtgataactggatg
aattcccatgtagcgagtttttcagggattgactcctcttacagtttacctgataatgtt
gctctagtaactctccaggagctcgatgacggaaaagttctccttcggttagcacatcta
tatgagattggagaagacagggatctttctgtactgacacacgtagagctgaaaaagctg
ttccccaagaagaagatcagtaaagtcacagagacaaacttatctgcgaatcaagaaaga
acagaaatggagaagaagaggcttgtttggaaagtggaaggctcttcacgagaagaaaag
atcacgaggggtggacctgtcgatcctgcaaaacttgttgtagaactcgcccccatggaa
atccgcacctttgttattgacttcaattcagtgtccatggtgatgtag
DBGET
integrated database retrieval system
