Carya illinoinensis (pecan): 122302253
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Entry
122302253 CDS
T08745
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1A-like isoform X1
KO
K15559
regulator of Ty1 transposition protein 103
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cill03021
]
122302253
Transcription machinery [BR:
cill03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
122302253
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
CID
ALIX_LYPXL_bnd
Cep57_MT_bd
CREPT
CTK3
Motif
Other DBs
NCBI-GeneID:
122302253
NCBI-ProteinID:
XP_042969362
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Position
3:639632..647347
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AA seq
525 aa
AA seq
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MGSAFNPQILAEKLAKLNSSQASIETLSHWCIFHMNKAKQVVETWDRQFNCSPREQRLAF
LYLANDILQNSRRKGSEFVGEFWKVLPGALRDVIENGDDYGRNSALRLIDIWEERKVFGS
RGQLLKEGLAGRQIENNNRNGKNLSFKLRPSAGNILEKIVSDYHILYGGQLDEEVVLSKC
TNAVSSLEKVDKEIGGDINSGQFHGSGFVEELQGQHAVLRDCIEQLTAVESARTTLMSHL
REALQEQEFKLGQVRNQLQAAQSRSEQAGSVCQRLSNRDKVQSLLEQSPREAQTSMAPHG
FIPGDREQSAPVMYTRQVSFPEKSGHVEEDPRKSAAAAVAAKLTASTSSAQMLSYVLSSL
ASEGVIGNPMKETPCDYPPEKRHKLENDQSSYMPAQNLHRPPVPPYPHPESIQHVSATNQ
QFTPNEPPPPPSTSPPPLPPLPPIAQYTVPQYMHSAGSITSAPYSYGMAQQQLPSMPSYL
TVGAPVNAIPPFSTPPTNSYQGFQGSDVNIYNQPSSMPMSPISRQ
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgggcagtgcattcaatccacagattttggcagaaaagctggccaagctcaacagttca
caggcgagtatagagactttgtcacattggtgtatattccatatgaataaagcaaaacaa
gttgttgaaacatgggatcggcagtttaattgttctccacgtgagcagagattggccttt
ctatatcttgcaaatgacatattgcagaacagtaggcgaaagggctcagagtttgttggt
gagttttggaaggttcttccaggtgctcttcgtgatgtgattgaaaatggggatgattat
ggaaggaattctgcactacgactgattgatatatgggaagaaagaaaagtttttggttct
cgggggcaacttctgaaggaagggcttgcgggtagacaaattgaaaataataatagaaat
ggaaagaatttgagcttcaaactgagaccatctgctggaaatatattggaaaaaatagtt
tcagactatcatattctttatggtggccagttggatgaagaagttgtactgagcaagtgt
accaatgccgttagcagtcttgagaaagtagataaggaaattggtggcgatattaattca
gggcaattccatggatctggttttgtggaggagctgcaggggcagcatgcggtactgagg
gactgtattgaacaattaacggcggtagaatcagcaagaacaactctcatgtctcattta
agagaagccctccaggagcaggaattcaagctgggccaagtccgcaatcaacttcaggcc
gcacagtcccgatcagaacaggcaggtagtgtctgccaacggttatcaaatagagacaaa
gttcagtcactacttgagcagagcccaagggaagctcaaacctccatggcacctcatggt
ttcataccaggggatagggaacaatcagctcctgtaatgtacacacggcaggtttccttt
cctgaaaaatctggccatgttgaggaagacccacgcaagtcggccgctgctgcagtggca
gcaaagctaactgcgtcgacatcctcagcgcagatgctctcctatgtcttatcctcgctt
gcatcagagggtgtcataggcaatccaatgaaagaaaccccttgtgattacccccctgaa
aagaggcataagcttgaaaatgaccaatcctcttacatgcccgctcaaaatcttcatcga
cctccagttcctccttaccctcatcctgaatctatacaacatgtctctgctaccaaccaa
cagtttactccaaatgagccaccaccacctccctcaacatctcctccaccactgcctcca
ctgccgcctatagcgcaatacacagtgccccagtacatgcactctgcaggatcaataaca
agtgcaccatacagctatggcatggcccaacaacagctgccttcaatgccgagttatctg
acagttggggctccagtgaatgctatacctcccttcagtacacctcctacaaattcttat
cagggttttcagggttcagatgtcaatatctataaccaaccatcatccatgccaatgtct
ccaatttctcggcaatag
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