Carya illinoinensis (pecan): 122302285
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Entry
122302285 CDS
T08745
Name
(RefSeq) auxin response factor 8-like isoform X1
KO
K14486
auxin response factor
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
122302285
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Motif
Pfam:
ARF_AD
B3
BRWD_AD
AUX_IAA
PB1
SIS_2
Motif
Other DBs
NCBI-GeneID:
122302285
NCBI-ProteinID:
XP_042969405
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Position
3:1017402..1034650
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AA seq
878 aa
AA seq
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MKLSTSGLSQLDHEGGTGEKKSLNSELWHACAGPLVSLPTPGTRVVYFPQGHSEQVAATT
NKEVDGHIPNYPSLPAQLICQLHNVTMHADVETDEVYAQMTLQPLTPEEQKDTFLPMELG
IPSKQPANYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLVVSVTSLLFVLILSGMLLHFL
FILVLQDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDS
VLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTIFYNPR
ASPSEFVVPLSKYVKTVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNS
HWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWHPGVSSLHDSRDE
GTNNGLMWLRGGTGEHGVNSLNFQGVGLFPWMQQRLDPTLFGNDHNQQYQAMLAAGMQNL
GSGDLLRQQIMQFQQPLYFQQRESHTSLLQQQQQQQQQQPEAFTQTLPRNILQAQTQVLT
ENIPQHLIQQPLNNQQEEQARQQQHAFQNTVHIRSDQLHQRLQSNVPSSSFAKADFMDPS
TKFSASIPPRQNMVGSFCPEGSSNFLNFSRVGQSMLAEQLPQQSWVSKYTHSQTNAYANS
MSQTPYPGKDANEEPENCNSDSQNPTLFGVNIDSSGLLLPTTLPTFATSVDADVTSMPLG
DSGFQSSLYGSVQDSSELLRSAGQVDPPTPSRTFVKVYKSGSVGRSLDISRFSSYNELRE
ELAQMFGIEGRMSEGPLRSGWQLVFVDRENDVLLLGDDPWDAFVNNVWYIKILSPDDVHK
MGEQAVESFSPHVAQRLNNGGEVQDLVPGLPSPGMLEY
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgaagctttcaacatcggggttgagtcagctggatcatgaaggaggaacaggggagaag
aaaagcttaaattcggagctgtggcatgcttgtgctggaccgctggtgtccctaccgacg
ccggggacccgtgtcgtctacttccctcagggccatagcgagcaggttgctgccactact
aacaaagaagttgatggacacattcccaattacccgagcttgccagcccagttgatttgt
caactccataatgtcacaatgcatgctgatgtggaaacggatgaagtatatgcgcaaatg
acattacagcctttgacgccggaagaacaaaaggatacgttcctccctatggaattgggg
attccaagcaagcagcctgccaattacttttgcaagacattgacagcgagtgacacaagt
acccatggagggttctccgttcctcgtcgtgctgctgagaaagttttccctccactggta
gtgtccgttacttcacttctttttgttttgattctaagtgggatgttgttgcattttctt
tttattttggtcctgcaggatttctcacaacagccaccagctcaggaacttatcgcaagg
gatctccatgatgtcgagtggaagtttaggcatatttttcgaggacagccaaaacgtcat
cttcttactacaggctggagtgtgtttgtaagtgccaaaagacttgttgcaggggattct
gttctcttcatctggaatgaaaaaaatcagctacttttgggaattcgccgtgccactcga
ccacaaactgtgatgccatcatctgttttatcgagtgatagcatgcacattggactccta
gctgctgctgctcatgctgctgcaaccaatagctgttttactattttctataacccaagg
gccagtccgtctgagtttgttgtacccctttcaaagtatgttaaaactgtatatcacaca
cgtgtatcagttgggatgcgtttccggatgctttttgagactgaagagtcgagtgtcaga
aggtacatgggtacaataactggaataagtgatctggatcctgtccgttggccaaattct
cattggagatctgtcaaggttggttgggatgagtcaacagctggtgagaggcagccgagg
gtgtctttgtgggaaattgaacctttaacaactttccccatgtatccatcattgtttccc
ctgagacttaaacgcccctggcatcctggggtctcatctttgcatgatagcagggatgaa
ggaactaacaatgggttgatgtggttaaggggtggaactggagaacatggagtcaactcc
ctaaattttcagggtgttggtttgtttccctggatgcagcagagactggacccaactttg
tttggaaatgatcataatcagcagtaccaagctatgttggctgctggaatgcagaaccta
ggaagtggagatctcctgaggcaacaaattatgcaatttcagcagcccttgtattttcaa
cagcgagagagccatacttcactcttgcagcagcagcagcaacaacaacaacaacaaccg
gaggcatttacccaaaccttgcctcgtaacatcctgcaggcacaaacccaagtcttaaca
gagaacataccccagcaccttatacagcaacctcttaacaaccaacaagaagaacaggca
cgacagcagcaacatgcctttcagaatacggttcacatccgaagtgatcagctgcatcaa
agactgcagtcaaatgtgccttcttcatcttttgcaaaagcagacttcatggatccaagc
acaaagttctcagcatctattccccctagacagaatatggtcggttcattctgtcctgaa
gggagtagcaattttttgaacttctccagagttggtcagtctatgctagctgaacagtta
ccccaacaatcctgggtctctaagtacacacattcacagactaatgcttatgccaattca
atgtcacaaacaccatatcctgggaaagatgctaatgaagagccagagaattgcaattct
gattcccagaatcctactctttttggtgttaatatcgattcatcagggcttctactccct
accaccttgcccacttttgctacttcagttgatgctgatgtgacatctatgccattaggg
gattccggatttcagagttccctgtatggttcggtgcaagactcttctgagttgttgcgg
agtgcagggcaagttgacccaccaaccccatctcggacatttgtcaaggtttataaatca
gggtccgttgggcgctcactggacatctcccggttcagcagctataatgagctgcgagag
gagctggctcagatgtttggaattgaggggaggatgtcggaaggccctcttagatcaggc
tggcagcttgtatttgttgacagggagaatgatgtgcttctccttggagacgacccatgg
gatgcgtttgtcaataatgtttggtacatcaagatactttcacctgatgatgtccataaa
atgggagagcaagcagttgaatccttcagcccacatgtggctcagaggctgaacaacggt
ggtgaagttcaagaccttgtcccagggttaccgtctcctggcatgcttgagtactga
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