Carya illinoinensis (pecan): 122302304
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Entry
122302304 CDS
T08745
Name
(RefSeq) general transcription factor 3C polypeptide 3
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cill03021
]
122302304
Transcription machinery [BR:
cill03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
122302304
TFIIIC, fungi type
122302304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_14
TPR_2
TPR_8
TPR_7
TPR_9
TPR_CcmH_CycH
TPR_11
TPR_1
TPR_16
TPR_12
DUF2225
ARM_TT21_5th
HAT_PRP39_C
Motif
Other DBs
NCBI-GeneID:
122302304
NCBI-ProteinID:
XP_042969429
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All DBs
Position
3:1151486..1177590
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AA seq
916 aa
AA seq
DB search
MGVEDGMKVDVREEEEEEEEEGQEEEEEGGEEEDNDDEGEYTFRFKDGINPLDFVEDDAD
SGVQPYEQFERLEYEALAEKKRKSLANNQREENSKKARQEDISGAIVDEIMEAMNYGVRR
KSRKPKKRGRRKGSKNKLSPEITRMLGDATLHYAHGCFEEAKSVLHEVIRLAPNLPDPYH
TLGLVHNALGDDKKASNFYMISAHLKPKNSSLWKRLLTWSIEQGNIGQANYCLSKAITAE
PKDITLRSHRASIHVALGDYQKAAESYEQIYQLNLDNIEALKKGAKLYQKCGQLEHSVRI
LEDYVKSHPSEADLSVIDLLAAIFMECNSYEKALQLIEHANLIYCSGKEPPLNLTVKEGI
CHVHLKNLEKAEALFGVLLHKSINDHADLITEAADSLMNLEHYSSALKCYLMLEGSAEGD
NGFLYLKIAQCYSSLKERLQAILFLYKALQMLEDNVNARLTLASLLLEESKEDEAISLLT
PKNLDSINIPPEKSKPWWLNEKVKLKLAHIYRAKGMLEDFVDAVFPLVRESLYVETLHPK
VKVKKRLSRKVLFERVRVLDDQETENVFCGFRPVAASSDLSKAARARRLLQKKATLREKK
RAEALASGADWQSDDSRDDESPQEVLREPPLPDLLKDEEHHRLIIDLCKSLASLRRYWEA
LEIINLTLRLAHNMLSAEKKEELRSLGAQIAYNTTDPKHGFDCVKYIVQQHPYSLAAWNC
YYKVISRLENRDSRHFKFLRGMLGKLQDCVPPIIIYGHQFTMASNHQHASSKYLEAYKLL
PENPLVNLCVGTSLINLALGFRLQNKHQCLAQGLAFLYNNVHLCENSQEALYNIARAYHH
VGLVTLAALYYEKVLATHAKDYPIPKLPCEDPDIVENRKPGYCDLRREAAYNLHLIYKKS
GAFDLARQVLKDHCTI
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgggtgttgaagacggcatgaaagtagatgttagggaagaagaagaagaggaagaagaa
gagggacaagaggaagaagaagaaggaggagaagaagaggacaatgatgatgaaggggag
tatactttcagatttaaagatgggataaatcccttggactttgtggaagatgatgctgat
tctggtgtccaaccatatgagcaattcgagcgccttgagtatgaagctctggctgagaaa
aaacgaaaatcacttgccaataatcagcgtgaagaaaattcgaagaaggccaggcaagaa
gatatatctggagcaatcgtagatgaaataatggaagccatgaactatggtgttcgaagg
aaatcaaggaagcctaagaaaaggggtaggcggaaagggtcaaagaataaactcagccct
gaaattacaagaatgcttggagatgccactcttcattatgcacatggttgttttgaagag
gccaaatcagtgttgcatgaagttattaggctagcaccaaatttgcctgacccgtatcac
acccttggacttgtccataatgcacttggtgatgataagaaagcctcaaatttctacatg
atttctgcgcatttgaaaccaaaaaattcatccctatggaagcggcttcttacctggtcc
attgaacaaggaaacattggtcaagctaattattgcctttctaaagcaataacggcggag
cctaaggatattactctaagatctcatcgtgcatcaatccatgttgcgcttggagattat
caaaaagctgcagagtcatatgaacaaatatatcaacttaatcttgataacattgaagca
ctcaagaaaggggcgaagttgtaccagaaatgtggtcagcttgaacattctgtccgcatt
cttgaggattatgttaaaagtcatccaagtgaagctgatttgagtgtgattgatctgcta
gctgccatattcatggaatgcaattcttatgaaaaagctctccaacttattgagcatgca
aacctgatctactgttcaggaaaagagccacctttgaatttgacagtaaaagaaggaatc
tgtcatgttcaccttaaaaatttggagaaggcagaggctctctttggtgttttgctgcac
aaaagcataaacgatcatgctgacttgatcactgaagctgcagactcattgatgaatctt
gaacattatagctctgcattgaagtgctatctgatgttggaaggaagtgctgaaggtgac
aatggtttcttatatctgaaaattgctcagtgttactcatccttgaaagaaagattgcaa
gcaattctcttcttgtacaaagctctacaaatgcttgaggataatgtcaatgccagatta
actcttgcttccctcctcctggaagaatctaaagaagatgaagcaatatcgttgcttact
ccaaaaaatttagactctatcaacatacctcctgaaaaatctaaaccatggtggctgaat
gaaaaggtgaaattgaagcttgctcacatatatagagctaaagggatgcttgaggacttt
gtggatgcagtcttccctttagttcgcgagtcattgtatgttgaaactcttcatcctaag
gttaaagtgaaaaagagactctcaagaaaagttctgtttgaaagagttagagtactggac
gatcaagaaacggagaatgtattttgtggatttagaccggtcgctgcctcgtcggatctg
tcaaaagctgccagagcaaggcggttacttcagaagaaggcaacattaagggaaaaaaag
agagccgaggcactggcttcaggggctgattggcaaagtgatgattctagggatgatgag
tctccgcaagaagtgctccgagaacctcccttgcctgatcttttgaaagatgaagagcat
catcgccttataatagatttgtgtaaatcactggcttccttgcgaagatactgggaagca
ttggagattattaacctcactttaagattggctcataacatgctgtctgcagagaagaaa
gaggagcttcgatctcttggagctcagatagcttacaacaccacagatcctaagcatgga
tttgactgtgtaaaatacatcgttcagcagcatccttacagccttgctgcctggaattgc
tattacaaagtaatttcaagactggagaatcgggattcaaggcattttaaatttctacgc
ggtatgcttggtaaactccaagattgtgtaccacccattatcatctatggacatcagttt
accatggccagcaatcatcagcatgcttcaagtaaataccttgaagcttataaactgctg
ccagagaatccattagttaatctttgtgttggaacttccttgattaatttagcactagga
ttcagacttcaaaacaagcatcagtgtcttgcgcaaggcttggctttcctctacaacaac
gtacatctttgtgaaaacagccaggaagcgttatataacatagccagggcgtatcatcat
gttggccttgtaactcttgctgcgttatattacgaaaaagtgcttgcaactcatgcaaaa
gattaccccataccaaagcttccctgtgaggatccagacattgtggaaaatcggaagccg
ggatattgtgacctccgcagagaagcagcttataacctgcatctgatctacaaaaagagc
ggagcatttgatcttgctaggcaagtcttgaaagatcattgcaccatttga
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