KEGG   Carya illinoinensis (pecan): 122302308
Entry
122302308         CDS       T08745                                 
Name
(RefSeq) CLP protease regulatory subunit CLPX1, mitochondrial
  KO
K03544  ATP-dependent Clp protease ATP-binding subunit ClpX
Organism
cill  Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:cill00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:cill03110]
    122302308
Chaperones and folding catalysts [BR:cill03110]
 Heat shock proteins
  HSP100
   122302308
SSDB
Motif
Pfam: AAA_2 AAA ClpB_D2-small AAA_22 AAA_5 Mg_chelatase RuvB_N MCM Sigma54_activ_2 Sigma54_activat AAA_14 AAA_16 IstB_IS21 AAA_7 ABC_tran AAA_28 T2SSE nSTAND3 DEAD AAA_24 AAA_18 Terminase_6N AAA_29 TsaE RNA_helicase NACHT ResIII
Other DBs
NCBI-GeneID: 122302308
NCBI-ProteinID: XP_042969438
LinkDB
Position
3:complement(1197241..1213124)
AA seq 702 aa
MSGILRWRNKVNRMTLLLASHSSRSNHPQRFTQVSSISTHLNHFQVGTHRRRDSLIGVQE
RYKWDHGGSDSDGLKHNHIRKIRAASNCPRCFKHMDLLFSFSNRHNLVPPVPLGTLDDVD
DDLAHHAKTGAAVNLCPNCKTAYYFRPHRIVPLQGSFVEIGRVNNTPTRPRNSNKADGNG
NGGGEEDYRNNNTIANSNNQLRASFWDNLRSYSSGGDPPENWAPPPSGNGLAVHTPPGPP
FAPGVNVVRASGPGGGGTAGGGDGRSNGEINAWGGSNLGKDLPTPKEICKGLDKFVIGQD
RAKKVLSVAVHNHYKRIYHASLRKGLGTESGIPERIDDDDNVELDKSNVLLMGPTGSGKT
LLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLAAAEFNVQAAQQGMVYIDEV
DKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFI
CGGAFIDLEKTISERRQDSSIGFGAPVRANMRTGGVTNAVVTSSLLESVESADLIAYGLI
PEFIGRFPILVSLLALTEDQLVQVLTEPKNALGKQYKKLFGMNNVKLHFTQRALRLIAKK
AMAKNTGARGLRAILESILTEAMYEIPDMKTGNERIDAVVVDEESVGSADTPGCGGKVLH
GDGALEHYLAETKLKNSEDNVEAAEGELQEGDSDLSSRAMSM
NT seq 2109 nt   +upstreamnt  +downstreamnt
atgtctggaatcttgagatggaggaacaaggtgaatcggatgacgctgctgctggcatcc
cacagctcccgttccaaccacccccaacggttcacgcaggtctcgtctatctcgacccac
ctaaaccacttccaagtgggtacccaccgccggcgcgactctcttatcggagtccaagag
cgttacaagtgggaccacggtggctctgacagcgatggcctcaagcataaccatatccgc
aagattcgtgcggcgtccaattgccctcgctgcttcaagcacatggatcttctattctcc
ttctccaatcgccacaatttagtcccgccggttccgcttgggaccttggatgatgttgat
gatgatcttgctcatcatgctaagaccggagcagccgtcaatctctgccccaattgtaaa
accgcttactacttccggccccacaggattgtccccctccagggcagctttgtcgagata
ggcagagtcaataatacacctaccagacccaggaacagcaacaaagctgatgggaatggt
aatggtggtggagaagaggattatcggaataataacactattgctaactcaaataatcag
ttgagggcctcgttttgggacaatttaagatcctacagttctggtggggacccgccagag
aattgggctcccccgccttcgggaaatggcttggccgtccatactcctcccgggccgcct
tttgcgcctggggttaatgtggttcgggcgtcaggacccggtggtggtggcactgccggt
ggcggtgatgggagaagtaatggagagataaacgcatggggcgggtcgaatttgggcaaa
gatttacccacgccaaaagagatctgcaagggtctggacaagtttgttattggccaagat
agagccaaaaaggtactttcagttgctgtacataatcactataaaagaatatatcatgca
tccctgcggaaagggctaggaacagaatcaggaattcctgagagaatagatgacgacgat
aatgtggagctagataagagcaacgtccttttgatgggcccaactggctcagggaagaca
ctgcttgcaaaaacactagctcgatttgtgaatgtgccctttgtcatcgctgatgcaaca
actttgacacaggcaggttatgttggagaagatgttgaatcaatcttgtacaaattactt
gcggcggctgagttcaatgtacaagcagctcaacaagggatggtatacattgatgaagtt
gacaagataactaagaaggccgagagcttaaacattagcagagatgtctctggtgagggt
gtccaacaggcattattgaaaatgctagaaggaacaatagtcaatgttcctgagaaggga
gcaaggaagcatcctcggggcgataacatacagatagatacaaaagatatcctttttata
tgtggtggagcatttattgatcttgagaaaaccatttcagagaggcgtcaagactcatca
attggttttggagcacctgttcgtgcaaacatgagaactggtggagtaaccaatgctgta
gtgacgtcatccttacttgagtcggttgaaagtgctgatcttatagcatatggtctcata
ccggagtttattggacgttttccaattttagttagtttgttagctttaactgaggatcaa
cttgtgcaggtcctcacagaaccaaaaaatgctcttggtaagcagtacaagaaattgttc
ggcatgaacaatgtgaagctacattttacacagagagcattgagactgattgccaagaaa
gcaatggcaaagaataccggtgctaggggtttaagggccatactggaaagcattcttact
gaagccatgtacgagattccagatatgaagacaggaaatgagagaatagatgctgttgtg
gtcgatgaggagtcagtgggttcagcagatacccctggatgtggagggaaagttctccat
ggggatggtgcattggagcattacttagcagaaaccaagttgaaaaactcagaggataac
gttgaggcagcagagggagagttgcaggagggggattcagatctgtcatctagagccatg
agcatgtaa

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