Carya illinoinensis (pecan): 122302356
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Entry
122302356 CDS
T08745
Name
(RefSeq) far upstream element-binding protein 2-like isoform X1
KO
K13210
far upstream element-binding protein
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cill03019
]
122302356
03041 Spliceosome [BR:
cill03041
]
122302356
Messenger RNA biogenesis [BR:
cill03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
122302356
Spliceosome [BR:
cill03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
122302356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_KhpA-B
KH_2
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
122302356
NCBI-ProteinID:
XP_042969502
LinkDB
All DBs
Position
3:1604884..1611999
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AA seq
771 aa
AA seq
DB search
MAEEEVVAAEVSMDAPSDHKRKLEDLEPEAPEPNKPSTEHLADLNEDPVDDAPDEEADLS
APSEGPEVKRARLNEEPDGSAIENGYQCKEDNNDGPIRENDEQPTVESLQLEDAQPPTEE
IPQTVVDGNEGHLVENPETGNFEQPSVKDSLTETAQEPSKEGGQQPESMQLSSEVSQLED
ASQTMTRKMEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDSDADPYCATRPVEIIGS
LDNITKAEKLINAVIAEADAGGSPSLIARGLTTAQAAVASEQIEIQVPNEKVGIIIGKGG
ETIKGLQTRTGARIQVLIPQHLPEGDESRERTVRVTGDKKQIEMARELIKEVMNQPARPS
YGGFNQQAYRPRGSAGMPQWGPSAAAYDYQHRGSYPPHNSQYPPPAYGNYPQQMIPRGGY
GAGWEQRPPSMHGPPSHAGGYDYYGGQGGHFSDAPVSAQLSTPVPSHASGPSTAASMGPV
SSHANYNYGHPQGSDYGHSAPFSQAAPHQHGYGHGYDDPKYENHGPQHPYGGHGSSQPVY
PQAGPQPGYASQQYGKPQSYGMPSQGPPQSYGPPRATQPGDMPYQGSVPAQSYGPNAPPQ
QPYPYGSGAQVQQTYPPYGSAPAADGYSQPPAASGHIYPQQGVQPGYGQSGSQQVPGYAQ
VGAAGGYGPYAPSQQGYPEQAAANNVGYGYQGPQDHAAYSGGPAAAYSAPPSGQPGYAQP
ASTQPSYDQSIPQSGGYGAVPASASAAYGKTLSPQPGYAQYDSTQAYSASR
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggaagaggttgtagcggcagaggtgagcatggatgcgccttcggatcacaag
cggaagctcgaggacttggaacccgaagcccccgaacccaacaagccgagcaccgagcac
ctggccgatttgaatgaagaccccgttgatgatgcaccagacgaggaagctgatttatct
gccccctcagaagggcccgaggtgaagcgggcccgcctcaatgaagagcctgacggctca
gctattgaaaatgggtaccaatgtaaggaagataacaacgatggacctatcagagagaac
gatgaacagcctacagtggagagtttgcagttggaggatgctcaacctcccacagaagaa
attccacaaacagtggtcgatggcaatgaaggacacttggtggaaaatcctgagacaggc
aacttcgaacaaccatctgtcaaggattctttgacagaaactgctcaggagccatctaaa
gagggaggtcagcaacctgaaagtatgcaactgtcttctgaggtttctcagctagaagat
gcttctcaaaccatgacgcgcaaaatggaggtgcctaacaacaaggttggagttcttatt
ggcaaggctggggatactatacgttacttgcagtacaattcgggagcgaaaatccagatc
actagggattctgatgctgatccttattgcgcaacaaggcctgtggaaattataggaagt
ttagataatataaccaaggctgagaagcttataaatgccgtcattgcagaggctgatgcg
gggggttctccttcccttatagccaggggtcttacaacagcacaggctgctgtagcctct
gaacaaattgagatacaagttccaaatgagaaggttggtataataattggcaaaggtgga
gaaaccattaaaggcctgcaaactagaacaggagcacgcatccaggtattgatacctcaa
caccttccagaaggagatgaatctagagaaaggactgtacgagtgactggtgacaagaag
caaattgaaatggctagagagttgataaaggaagttatgaatcagcctgcgagaccttca
tatggtggatttaaccagcaggcttatcgaccccgtggatctgctggtatgcctcagtgg
ggtcctagtgctgcagcatatgattaccagcatcgaggatcatatccacctcataattca
cagtatccacctccagcatacgggaattatcctcaacaaatgataccaagaggtggctat
ggtgctggttgggaacaacggcctcctagtatgcatggtccaccttcacatgctggtggt
tatgattactatggcggacaaggagggcatttctctgatgctccagtatctgcccaactt
tctacccccgttccttcacatgcctctggcccttccactgcagcttcaatgggtccagtc
tcatcccatgcaaactacaattatggacacccacagggttccgattatggtcattcagct
cctttttctcaggcagcacctcaccagcatggctatgggcatggatacgatgatcccaaa
tatgaaaatcatggtccgcagcatccttacgggggacatggaagttctcagccagtttac
ccacaggcaggccctcaaccaggttatgcttcacaacagtatgggaaaccacaatcatat
ggcatgccatcacagggtcctccacaatcttatggcccacccagggctactcaacctggg
gacatgccttatcaaggctctgttcctgcccaatcatatggcccaaatgcaccgcctcaa
cagccctatccatatggatctggtgcccaggtgcagcaaacatatcctccgtatggttct
gcaccagctgctgatgggtatagtcagccaccagctgcatctggccacatttatccgcag
caaggagtgcagccaggttatggtcaatctggttcacagcaggtaccaggctatgcacaa
gttggtgctgctgggggttatggaccatatgcaccttctcagcaaggttatcctgaacag
gcagctgctaacaatgtaggctatggttaccaagggcctcaagatcatgctgcttacagt
ggtggtcctgcggcagcctatagtgcaccaccaagtgggcagccgggctatgcccaacca
gcatcaactcaacctagttatgatcagtctatcccacaatcaggcggttatggagctgta
ccagcaagcgcttcggctgcttatgggaaaacattgtcgcctcagcctggttatgctcag
tatgactcgacccaagcgtatagtgcatctcgctga
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