Carya illinoinensis (pecan): 122302442
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Entry
122302442 CDS
T08745
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1-like isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cill03041
]
122302442
Spliceosome [BR:
cill03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
122302442
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
DUF4523
Motif
Other DBs
NCBI-GeneID:
122302442
NCBI-ProteinID:
XP_042969634
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Position
3:2461620..2472372
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AA seq
473 aa
AA seq
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MSTSGQPQFRYTQTPSKVLHLRNLPWECIEEELIELCKPFGKIVNTKCNVGANRNQAFVE
FADLNQAISMVSYYASSSEPAQVRGKTVYIQYSNRHEIVNNKSPGDVPGNVLLVTIEGVE
VGDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFSDAETASAARNALNERSIPRYLL
PEHVNSCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAIEGVVQPALGPDGKRKEP
ESNVLLASIENMQYAVNVDVLHTVFSAFGTVQKIAIFEKNGQTQALVQYPDVSIAAVARE
ALEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTIPDASLLASQVSGLPGAPAVWQ
NPRPGPIYAGNDYNTGGSVPAQYPSRQMAPWDASMQAGRAPFGSVPSTYPGQNFAVATSQ
IPSAVSSMGFSSGFPPNVRPGGASSSSQLQPGIPPNVRPSGGPPPGHPTYYGQ
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacatcggggcagccccagttccgatacacccaaaccccctcgaaggtcctccac
ctccgcaatcttccctgggagtgcatcgaggaggagctcatcgagctttgcaagcctttc
ggcaagatcgtcaacaccaagtgcaacgttggcgccaatcgcaaccaggctttcgtcgaa
tttgcagatttaaatcaggccatatcaatggtttcatactatgcatcatcttctgagcct
gcccaagttcgtggcaaaactgtgtatattcaatactcaaatagacatgaaatcgtgaac
aacaaaagtccaggagatgttcccggaaatgtcttgctggttaccattgaaggtgtagaa
gttggtgatgttagcattgatgtaattcacttggtattttctgcttttggctttgtacat
aaaattgctacttttgaaaaggctgctggtttccaggcattaatccagtttagtgacgct
gagactgcatctgctgcaaggaacgccttaaatgaaagaagcatacccaggtatttgctt
ccagagcatgttaattcatgtcacctgcgtatttcgtattctgcacacactgatctgaat
atcaagttccagtctcacagaagcagggattatacaaatccatatcttcctgtgaatcct
actgcaattgagggtgttgtgcagcctgcactagggcctgatggaaagaggaaagaacct
gagagtaatgtgcttcttgcttcaattgagaatatgcagtatgctgtcaatgtggacgtt
ctgcacacggtattctctgcctttggcactgttcagaaaattgctatatttgagaagaat
ggtcaaactcaggcacttgttcaataccctgatgttagtattgcagcagttgccagagaa
gctttagagggacattgcatatatgatggtggctattgtaagcttcatctatcatactct
cgtcatactgatctcaatgtaaaggcttacagtgacaaaagtagagattacacgatccca
gatgcaagtttgcttgcatcacaagtgtcaggtctcccgggtgctccagcagtttggcaa
aatcctcggcctggtccaatatatgctggaaatgattataatactggcggttctgttcct
gctcagtatcctagcagacagatggcaccatgggatgcctccatgcaggccggtagagcc
ccatttggatctgttcctagcacttatcctggacaaaattttgccgtagcaaccagccaa
attccttctgcggtctcttcaatgggattttcttcagggtttccaccaaatgtgcgacct
ggtggtgcttcatcttccagccagcttcagccggggattccaccaaatgtgcgacctagc
ggtggtccgcctcctggtcaccctacttattatggccaatag
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