Carya illinoinensis (pecan): 122302455
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Entry
122302455 CDS
T08745
Name
(RefSeq) structural maintenance of chromosomes protein 4 isoform X1
KO
K06675
structural maintenance of chromosome 4
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cill03036
]
122302455
Chromosome and associated proteins [BR:
cill03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
122302455
Condensin II
122302455
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GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_29
AAA_15
PUMA_CC
ABC_tran
Motif
Other DBs
NCBI-GeneID:
122302455
NCBI-ProteinID:
XP_042969650
LinkDB
All DBs
Position
3:complement(2593493..2604685)
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AA seq
1245 aa
AA seq
DB search
MGMEAHDELMADGSDPVERRSQAPRLFIKEMVMRNFKSYAGEQRVGPFHKSFSAVVGPNG
SGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLESAGVSVHFQEIVDLDDGSYE
AVSGSDFVISRVAFRDNSSKYYINDRPSNFTEVTKKLKGKGVDLDNNRFLILQGEVEQIS
LMKPKSQGPHDEGFLEYLEDIIGTNKYVDKIDESYKQLESLDESRSGVVQMVKLAEKERD
GLEDVKNEAEAYMLKELSLLKWQEKATKLAHEDTDTNMVELQANVSSLEENLKTEREKIR
ESNKMLKELETVHNKYMKRQEELDNQLRSCKEEFKEFERQDVKYREDLKHMKQKIKKLED
KLEKDSSKAVDLEKECEDSTNLIPKFEENIPKLQKLLLDEEKVLEEIKENSKVETERYRA
KLAKVRAELDPWEKQLIEHKGKLEVACTESKLLSDKHEAGCAAFEDAQKQMDNIVGKIKA
KTARIANIQSDVGKNQLEALEARKLEQECIKEQDALIPIEQTARQKVAELKSILDSEKSQ
GSVLKAILQAKESNQIRGIYGRMGDLGAIDAKYDVAISTACPGLDYIVVETTSAAQACVE
LLRRENLGIATFMILEKQVALSPKLKEKISTPEGVPRLFDLIKVQDERMKLAFFAALGNT
VVAKDLDQATRIAYNGNKEFRRVVTLDGALFEKSGTMSGGGSKPRGGKMGTSIRAASVSG
ETVENAEKELSTMVEKLNSIRKRIAEAVQRYQTSEKEVAFLEMELAKTQKEIDSLNSQHH
YLEKQLRSLEAASQPGKDELDRLKELKELISNEEKEIDKLIKGSKELKEKALELQNSIEN
AGGERLKAQKLKVNRIQADIDKNSTEINRHRVQIETGQKLMKKLTKGIEDSKKEKERLVE
EKEKLRSVFKEIEQKAFIVQENYKKTQELIDQHKDALDEAKCDYDKVKKTVDELRASEVD
ADYKLQDLKKAYKELELKGKGYMKRLDDLQTALAKHLEQIQKDLVDPEKLQVTLTDLSLN
EACDLKSALEMVALLEAQLKEMNPNLDSISEFRRKVSLYNDRVEELNKVTQQRDNIKKQY
DEWRKKRLDEFMAGFNAISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKS
WKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDA
QFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFVVCEKAA
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atggggatggaagcgcacgacgagttgatggccgatgggtcggaccctgtcgagagaaga
tcccaagccccgaggctgttcatcaaagagatggtcatgaggaacttcaaatcatacgcg
ggcgaacagcgcgtcggccctttccacaagagcttttcagcagtggttggacctaatgga
agtggtaaaagcaacgtgatagatgcaatgctgtttgtattcgggaagcgagctaagcag
atgcgacttaacaaagtttcagagctcattcacaattcaactaatcaccaaaatttggag
agtgctggtgtttctgtacatttccaggaaatcgttgatctggatgatggatcatatgaa
gctgtttcagggagtgattttgtgattagccgggttgcctttcgtgataactcctctaag
tattatatcaatgaccgtccaagtaattttactgaagttaccaagaaactgaaagggaaa
ggagttgaccttgacaacaaccgttttttgattcttcagggtgaagtcgagcagatttca
cttatgaagccaaaatctcaaggacctcatgatgaaggttttcttgaatatctcgaggac
ataattgggactaacaagtatgttgacaaaatcgatgaatcatacaagcagctagaatcg
ctagatgagagcaggtctggggtggtgcaaatggttaagttggcagagaaagaaagagat
ggcttagaggacgtgaagaatgaagcggaagcatacatgctgaaagagttgtcccttttg
aaatggcaagagaaagccactaaattggcccatgaagatactgatacaaatatggttgaa
ttacaagcaaatgtttctagtttagaagaaaatctgaagactgaaagggagaagatccga
gaaagtaataaaatgttgaaggagctagaaactgtgcacaacaagtacatgaagagacaa
gaggaacttgataatcaactcagaagttgtaaggaggagtttaaggagtttgaacgccag
gatgtcaagtatcgggaagacttgaagcacatgaagcaaaagatcaagaaacttgaggat
aaactggaaaaggattcatcaaaggctgttgacttagaaaaggagtgtgaagactcgaca
aatctgatccctaaatttgaggaaaatattccaaaactgcaaaagctcttgctggatgag
gagaaagtcttagaggaaattaaagagaattctaaagttgaaactgagagatatcgtgct
aagcttgcaaaagttcgtgctgaattagatccttgggaaaagcaactgattgaacataaa
ggaaaacttgaagttgcatgtacagaaagcaagctgttgagtgataagcatgaagctggt
tgtgcagcatttgaagatgctcaaaagcagatggacaatatagtggggaaaataaaagca
aaaactgcacgcattgcaaatattcaatcagatgtaggaaagaaccagcttgaggcattg
gaagctcgtaaactggaacaagaatgcatcaaagaacaagatgcactgattcctattgaa
caaactgcaagacagaaggttgcagaactaaagtctatccttgactctgagaagagtcag
ggatcagttctgaaagctatcttgcaggctaaggagtccaatcaaatcaggggaatatat
ggtcgaatgggtgatcttggtgctattgatgcaaaatatgatgttgctatatcaacagca
tgtccaggacttgactatattgtagtggaaacaaccagtgctgcacaagcatgtgttgag
ctacttcggagggagaatcttggcattgcaactttcatgatattggagaagcaagttgct
ctttcacccaagttgaaggagaaaataagcactccggagggagttccacgccttttcgat
ttaattaaagttcaggatgaaagaatgaagcttgccttctttgcggcattgggaaacact
gtcgtagctaaggatcttgaccaggcaacacgtattgcatacaatggaaacaaagagttt
cgacgagtggtaacacttgatggtgcactttttgaaaaatctggtacaatgagtggtggg
ggaagtaagcctcgtggtggtaaaatggggacatctattcgagctgcaagtgtgtccgga
gaaactgttgaaaatgccgagaaggaactgtctacaatggttgaaaagttaaatagcatt
cggaaaagaattgccgaggcagtgcaacgttaccagacatcagaaaaagaagttgcattc
ttggagatggaattagctaaaacccagaaagagattgacagtttgaattcacaacatcat
tatcttgaaaaacaacttcgttccctggaggctgcatcacaacctgggaaggatgagctt
gataggttgaaggagcttaaggaattaatttctaatgaagaaaaggagattgataaactc
atcaaagggtctaaagagctgaaggagaaggctttggagcttcagaattctatagaaaat
gctggtggtgaaaggttgaaagcacagaagttaaaggtcaataggattcaagctgatatt
gacaaaaatagcacagagatcaaccgccacagagttcagatagaaactggtcaaaaattg
atgaaaaaattaacgaaaggtattgaggactcaaagaaggagaaagaaagacttgttgag
gagaaggagaaattgagaagtgtcttcaaagaaatagagcagaaagctttcattgttcaa
gagaattataaaaaaacacaggagctgattgatcaacataaagatgcgttagatgaagca
aaatgtgattacgacaaagtgaaaaagactgtcgatgaattacgtgcatctgaggttgat
gccgactacaagttacaagacttgaagaaagcatacaaggagttggaattgaaggggaag
ggttacatgaaaaggcttgatgatttgcaaactgctcttgcaaagcatctggaacaaatt
cagaaagatttagtggatcctgaaaagcttcaggtgaccttgacagatctaagtctcaat
gaggcttgtgacctaaagagtgcccttgaaatggtagcattgctggaagcccaactgaag
gagatgaatccaaatcttgattcaatctcagaatttcggagaaaggtttcattatataat
gaccgagttgaggaactaaacaaggtcactcaacagcgtgataacataaagaagcagtat
gatgaatggaggaagaagagattggatgagttcatggcaggattcaatgcaatatcgttg
aagctaaaggagatgtatcagatgatcacacttggaggcgatgcagaacttgagctagtg
gactctttggatcctttctctgaaggtgttgttttcagtgtcagaccaccaaagaagagc
tggaagaatattgcaaatttatcgggtggtgaaaagacactcagctcactggcccttgtt
ttcgcacttcatcactacaagccaactccgctttatgtgatggatgaaattgacgctgct
ctggacttcaaaaatgtttctattgttgggcattatgtgaaggacaggacaaaggatgct
cagtttataatcataagcctgagaaacaacatgtttgaattggccgatcgactcgtaggt
atctacaagactgataattgcaccaagagcattacaattaacccagggagttttgtagta
tgtgaaaaagctgcctga
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