KEGG   Carya illinoinensis (pecan): 122302472
Entry
122302472         CDS       T08745                                 
Name
(RefSeq) cullin-3A-like isoform X1
  KO
K03869  cullin 3
Organism
cill  Carya illinoinensis (pecan)
Pathway
cill04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:cill00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    122302472
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cill04121]
    122302472
   03400 DNA repair and recombination proteins [BR:cill03400]
    122302472
Ubiquitin system [BR:cill04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul3 complex
    Cullin
     122302472
DNA repair and recombination proteins [BR:cill03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     122302472
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 DNA_repr_REX1B Glyco_hydro_68 WAC_Acf1_DNA_bd
Other DBs
NCBI-GeneID: 122302472
NCBI-ProteinID: XP_042969689
LinkDB
Position
3:2766906..2772193
AA seq 733 aa
MSAQKKKNFQIEAFKHRVVVDPKYPEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMV
LHKFGEKLYSGLVTTMTSHLLEISRSIEAAQGEVFLEELNRKWADHNKALQMIRDILMYM
DRTFIPSTHKTPVHELGLNLWRDVVIHSSKTQIRLRDTLLELVYRERNGEVINRGLMRNI
IKMLMDLGSAVYQEDFEQHFLEVSADFYRLESQQFIESCDCGDYLKKAERRLNEEMERVS
HYMDARSLDKITNVVEKEMIESHMQRLVHMENSGLVNMLVNDKYEDLGRMYNLFRRVPTG
LSIVRDVMTSYIRDTGKQLVTDPERLRDPVDFVQRLLDLKDKYDEIITLAFGNDKTFQNA
LNSSFEYFINLNARSPEFISLFVDDKLRKGLRGVSEEDVEIVLDKVMMLFRYLQEKDVFE
KYYKQHLAKRLLAGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSEDTMQGFYA
SHGTELGDGPTLAVHVLTTGSWPTQPSATCNLPAEILGVCEKFRSYYLGTHTGRRLSWQT
NMGTADLKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYKEIEQATEIPASDLKRCLQS
LACVRGKNVLRKEPMSKDIAEDDAFFFNDKFMSKLYKVKIGTVVAQRESEPENQETRQRV
EEDRKPQIEAAIVRIMKSRRTLDHNNIVAEVTKQLQARFLPNPVVIKKRIESLIEREFLE
RDKNDRKMYRYLA
NT seq 2202 nt   +upstreamnt  +downstreamnt
atgagcgctcaaaagaagaagaacttccaaatagaggcgttcaagcaccgggtcgtggtg
gatccgaaataccctgaaaagacgtggaagattctggagcatgcaatccacgagatttac
aatcacaatgctagcgggcttagcttcgaagagctttataggaatgcttacaatatggtg
ctgcacaaatttggagagaaactatactctggactcgtgacaactatgacgtctcatcta
cttgaaatatctagatcaattgaagcggctcagggggaggtattcttggaagagctgaac
aggaagtgggccgatcataacaaggcattgcaaatgatccgagatatattgatgtacatg
gataggactttcattccaagcacccacaaaaccccagttcacgagcttgggttgaactta
tggagagatgttgttatccactccagcaaaacccagattaggcttcgggatacactcctt
gagcttgtgtatagagaaaggaatggtgaagttataaatagaggtttgatgaggaatatt
ataaagatgttaatggatttaggttctgctgtttaccaagaagacttcgagcagcatttt
cttgaagtttcagctgatttttaccgtcttgagtctcaacaattcattgagtcatgtgat
tgtggggattatttaaagaaagctgagagacgtctaaatgaagaaatggagagagtgtcc
cattatatggatgctagaagtttagacaagataactaatgttgttgaaaaggagatgatt
gaaagtcatatgcagagactagtccatatggagaactcaggcttagttaacatgcttgtg
aatgacaaatatgaggatttgggaagaatgtataacttgtttcgcagggtgcccactgga
ctgtcaatagttcgggatgttatgacctcctacattcgggataccggcaagcagctagtg
actgatccggaaaggttgagggatccggttgactttgtgcaacgtttgttggatttaaag
gataaatatgatgaaatcatcactttggcatttggaaacgacaagacgttccagaatgct
ttgaattcctcttttgagtacttcatcaatttgaatgctcggtccccggaattcatttct
ttgtttgtggatgacaagctccggaaaggactgagaggggttagtgaggaggatgtggag
attgtactggacaaggtcatgatgcttttccgttacctacaagagaaagacgtatttgag
aagtattacaaacaacatttggccaagaggcttcttgcggggaaaactgtctctgatgat
gcggaaagaagtctgattgttaagcttaaaacagagtgtggataccaatttacgtctaaa
ctggaaggtatgttcactgatatgaagacctcagaggataccatgcagggcttctatgca
agccatggcactgagttaggggatggccccacattagctgttcatgtactcactacaggt
tcttggcctactcaaccgagtgctacatgcaaccttccagcagaaatcctgggggtatgt
gagaagttcaggagttattatcttgggacgcatactggtcgtaggctgtcctggcaaacg
aacatgggcactgctgatttgaaagcgacctttgggaagggccagaagcatgagctcaat
gtttccacctaccagatgtgtgtactgatgcttttcaacaatgccgataggctgagttat
aaggagattgagcaagccacagagatacctgcctcagacttgaagagatgcctgcagtct
ctggcttgtgtcagggggaagaatgttttgcggaaggagcctatgagcaaggacatagct
gaggacgatgccttcttcttcaatgacaagttcatgagcaagctctacaaggtaaaaata
ggtaccgtggttgctcagagggaatctgaacctgaaaatcaggaaacccggcagagagtg
gaggaggacaggaagcctcagatcgaggctgcgattgtgagaatcatgaagtcacggcgg
acgctagatcataataacattgttgctgaggtcacaaagcagctgcaggctcggttcttg
cccaaccctgttgtcataaagaaacgaattgaatccctcattgagcgggagtttttggag
agggacaaaaatgataggaaaatgtatcgatatcttgcttga

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