Carya illinoinensis (pecan): 122302488
Help
Entry
122302488 CDS
T08745
Name
(RefSeq) FACT complex subunit SSRP1 isoform X1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cill03000
]
122302488
03036 Chromosome and associated proteins [BR:
cill03036
]
122302488
Transcription factors [BR:
cill03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
122302488
Chromosome and associated proteins [BR:
cill03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
122302488
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
SSrecog
Rttp106-like_middle
HMG_box
HMG_box_2
CDC45
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
122302488
NCBI-ProteinID:
XP_042969707
LinkDB
All DBs
Position
3:2916413..2925326
Genome browser
AA seq
643 aa
AA seq
DB search
MTDGHLFNNISLGGRGGTNPGQLKIYSGGILWKKQGGGKAIEVDKADIMGVTWMKVPRTN
QLGVRIKDGLFYKFTGFRDQDVTSLTNFFENTCGITPEEKQLSVSGRNWGEVDLNGNTLS
FLVGSKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFV
GDENRPPAQVFREKIMSMADVGAGGEEAVVTFEGIAILTPRGRYNVELHLSFLRLQGQAN
DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVDNALSIS
EDLLNTKYKDKLEPSYKGLIHEVFTTILRGLSGSKVTKPGKFRSCQDGYAVKSSLKAEDG
VLYPLEKSFFFLPKPPTLILHEEIEYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ
RNEYHNLFDFISGKGLKIMNLGGFQTTDGVARVLQDEEDDAVDPHLERIKNLAGGDESDE
EDEDFVIDKDDGGSPTDDSGEEESDASESGDEKEKPGKKESRKETMSSKATSSKKKSRDG
DEDASKKKKQKKKKDPNAPKRAMSGFMFFSQMERENVKKSNPGIVFTEVGRALGDKWKKM
TAEEKEPYEAKARQDQKRYREEISGYKNQQPMNIDSGNESDSS
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacggccacctcttcaacaatatctctctcggaggccgtggaggcactaatcca
gggcagcttaagatatattcaggagggattttatggaagaaacaaggaggcggtaaggca
attgaggttgataaagctgacatcatgggggtgacatggatgaaggtcccaaggacaaat
caacttggtgtccgaatcaaagatggattattctataagttcactgggttccgagaccag
gatgtcactagtttgaccaatttttttgaaaacacttgtggtataacaccagaggagaag
caactttctgtcagtgggcgtaattggggagaagttgatttaaacggtaatacactgagt
tttttggttggttcaaagcaagcatttgaggtatctctggctgatgtctcacaaactcag
cttcaagggaaaaatgatgtaatcttagaattccatgtggatgatacaactggagctaat
gagaaagattcattgatggaaataagttttcacatacctaattccaacacccaatttgtt
ggtgatgagaatcgtcctcctgctcaggttttccgtgaaaaaataatgtcaatggcagat
gttggtgctggaggtgaagaagctgtggttacctttgagggcattgcaatcctcacacct
agggggcgatacaatgttgaacttcatctatcattcttacgacttcaaggacaggctaat
gatttcaagattcaatacagcagtgttgttcgtctgtttttgcttcctaagtctaaccag
ccacatacattcgttgttgttacccttgatccaccaatccgtaaagggcaaactttgtac
ccacacatagtgttgcagtttgaaactgactatgtagtcgataacgccctgtcaataagt
gaagatcttttgaacaccaaatataaagacaagttagaaccatcttataagggactcatt
catgaagtgttcaccacaatattgcgtggcttgtctggttccaaagttactaaaccagga
aaatttcgtagctgtcaagatggttatgcggtgaagtcatcattgaaggctgaagatgga
gtcctgtatccacttgaaaagagtttcttctttctaccgaaacctcctacgcttattctt
catgaagagatcgagtatgtggaattcgagaggcatgctgctggtggctcaaatatgcat
tactttgatcttcttataagactgaaaaccgagcaagaacatctttttcgtaacatccag
aggaacgaataccataatctttttgacttcatcagtgggaagggcttgaaaattatgaac
ctgggaggtttccaaactacagatggcgttgcacgtgttcttcaggatgaagaagatgat
gctgttgatccacatttggagcgcattaagaatctagctggtggagatgagagtgatgaa
gaggatgaagattttgttattgacaaagatgatggtggttctccaactgatgattctgga
gaggaggaatctgatgctagcgaaagtggagatgagaaagagaagcctgggaaaaaggaa
tccagaaaagagactatgtcttccaaggcaacttcttctaagaagaaatctagagatgga
gatgaagatgcttcaaagaagaaaaaacagaaaaagaagaaggatccaaatgcaccaaag
agggcaatgtctggtttcatgttcttctcacaaatggaaagagagaatgtcaagaaaagc
aaccctggtattgtgtttacagaagtggggagagcacttggagataagtggaaaaagatg
acagcggaggagaaagaaccatatgaagcaaaggctcgtcaagaccaaaaacgttacagg
gaggaaattagtggctacaagaaccagcaaccgatgaatatagattctgggaatgaatct
gacagctcatag
DBGET
integrated database retrieval system
