Carya illinoinensis (pecan): 122302519
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Entry
122302519 CDS
T08745
Name
(RefSeq) ABC transporter B family member 15-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122302519
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cill02000
]
122302519
04147 Exosome [BR:
cill04147
]
122302519
04090 CD molecules [BR:
cill04090
]
122302519
Enzymes [BR:
cill01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
122302519
Transporters [BR:
cill02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
122302519
Exosome [BR:
cill04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122302519
CD molecules [BR:
cill04090
]
Proteins
122302519
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
Zeta_toxin
ABC_ATPase
AAA_30
AAA_22
AAA_16
RsgA_GTPase
AAA_21
AAA_15
AAA_25
DUF3487
Motif
Other DBs
NCBI-GeneID:
122302519
NCBI-ProteinID:
XP_042969747
LinkDB
All DBs
Position
3:3227867..3234332
Genome browser
AA seq
1255 aa
AA seq
DB search
MGKEKGSVVVKKEKGSIRSMFMHADGVDLLLMAFGILGCVGDGFSTPLVLYISSKLMNDI
GGVSISLSQSFQHNINKNAVAMMYLACGSFVACFLEGYCWTRTGERQAARMRARYLKAVL
RQDVGYFDLHVTSTSEVITSVSNDSLVIQDAISEKVPNFLMNASMFIGSYIAAFLLLWRL
AIVGFPFIVLLVIPGLMYGRTLMGLARKIREEYNQAGTIAEQAISSIRTVYAFVGESKTT
AAFSAALQGSVKLGLSQGLAKGLAIGSNGVVFAIWSFMSYYGSRLVMYHDAKGGTVFVVG
AAIAVGGLSLGAGLSNLKYFSEAMSAGERILEVIKRVPKIDSDNMEGEILECVSAGSVEF
KHIEFAYPSRPESIIFKDFCLEIPAGKTLALVGGSGSGKSTVIALLQRFYDPLGGEILLD
GVAIDKLQLRWLRSQMGLVSQEPALFATTIKENILFGKEDATEEEVIEAGKAANAHNFIS
QLPHRYDTQVGERGVQMSGGQKQRIAIARAIIKKPRILLLDEATSALDSESERVVQEALD
KAAVGRTTIVIAHRLSTIRNADVIAVVQNGQVMETGSHDELNQIEDGLYTSLIRLQQTEK
QKGPEDHLVNYVNSSYISNVDMNNTSSRRLSMVSRSSSANSAAPSRASLAGDQDSIDDKK
FPVPSFRRLLGLNLPEWKQACLGCFGAILFGAVQPLYAFAMGSMISVYFLTSHDEIKDKT
KIYALCFLGLAVFSLLINVIQHYNFAYMGEYLTKRIRERMLSKILTFEVGWFDEDENSSG
AICSRLAKDANVVRSLVGDRIALIVQTFSAVVVACTMGLVIAWRLAIVMIAVQPIIIVCY
YTRRVLLKSMSSKAIKAQDESSKLAAEAVANLRTVTAFSSQDRILKMLDKAQEGPRLESI
RQSWYAGVGLGASQSLTTCTWALDFWYGGKLISQGSITAKALFETFMILVSTGRVIADAG
SMTSDLVKGSDAVGSVFAVLDRYTRIEPTDPEGYHAEKITGKVEIRDVDFAYPARPDVMI
FKGFSMVIEAGKSTALVGQSGSGKSTIIGLIERFYDPLKGAVKIDGRDIRSFHLRSLRKH
IALVSQEPTLFAGTIGENIAYGASDKVDETEIIEASRLANAHNFIAGLKDGYDTWCGDKG
VQLSGGQKQRIAIARAILKNPSVLLLDEATSALDSQSEKVVQDALEKVMVGRTSVVVAHR
LSTIKNCNKIAVLEKGRVVEMGTHSSLLEKGPNGAYYSLISLQRTPSTDISRPFN
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggaaaaaggcagcgtcgtcgtgaagaaggagaagggctccatacgctctatg
ttcatgcatgcggacggtgtagacttgttgttgatggcttttgggatccttggatgcgtt
ggcgatgggttctctacgccactggtgttgtatatcagtagcaagttaatgaacgatatc
ggcggtgtgtcaatttcgttatcacagagttttcagcataacatcaataagaatgcggtg
gctatgatgtacttggcttgtgggtcattcgtagcttgtttcctagaggggtattgttgg
accagaacaggtgaaagacaagccgcaagaatgagagctagatatttgaaggcagtgttg
cgccaagatgtgggttactttgatttgcatgtgacaagcacatccgaggtcatcacgagt
gtctccaatgatagcctcgtaatccaagatgctataagcgaaaaggtcccaaatttcttg
atgaatgcttctatgttcatcggaagctatatagcagcgttcttattgctatggagacta
gccattgtggggttcccatttattgtgcttctagtaattcctggtctgatgtacggaagg
actctaatgggactggcgaggaagatcagggaagagtacaatcaagcgggcacaatagca
gagcaggcaatatcttctatcagaacagtctatgcgtttgttggggaaagcaagacaacg
gcggcgttctctgcagctttgcaagggtcggtgaagttggggctgagtcagggcttggct
aaaggcttggccatcggaagcaacggcgttgtttttgctatttggtctttcatgtcttac
tacggtagtagacttgtcatgtaccatgacgccaaaggtgggaccgttttcgttgtcggt
gctgccattgccgttggtggattatctctaggtgctggtttatccaacttgaaatacttc
tctgaagcaatgtctgccggagaacgtatactggaagtgataaaaagagtccccaagatt
gactccgacaacatggaaggcgagatcttggagtgtgtctcagctggaagcgtggaattt
aaacatattgaattcgcatacccatcaagacccgagagcattatctttaaagatttctgc
ttagagattccagcaggaaagactcttgctttggtgggagggagtggctcgggaaaatcc
acagtgatagcactgttgcagaggttttatgacccacttggaggagagatacttcttgat
ggggttgccattgataagttgcagctcaggtggctaaggtcgcagatgggattggtgagc
caagagcccgcactttttgcaaccaccatcaaggaaaacatacttttcggcaaggaggat
gctacagaggaagaggttatcgaggctggcaaagctgccaacgctcacaatttcatttct
cagctccctcacagatatgatactcaggttggtgagagaggtgttcaaatgtcgggaggc
cagaagcagaggatcgccattgcgcgagcaataatcaagaaacccagaatcctactccta
gacgaggccacaagcgcattagactcagaatccgaacgggttgtccaggaagcccttgac
aaggcagccgttggccgcaccaccattgtcattgctcaccgtctgtccaccattcgaaat
gcagacgtgattgctgtcgtccaaaatggccaagtcatggagacagggtcacacgacgag
ttgaaccaaatcgaagatggcctttacacttcccttatccgtcttcaacagaccgaaaaa
caaaagggtccagaagatcatctagtcaattatgttaattcatcctacatatcaaatgtg
gacatgaataacaccagcagccgcaggctctccatggtgagcaggtccagttctgccaac
tcggcagcgccaagtcgagcttcacttgctggagatcaagacagtatagatgacaaaaaa
tttccggtaccatcgtttcggagattgctaggtttgaatctcccggagtggaagcaggca
tgcttagggtgtttcggtgctatattgtttggtgcggttcaacctttgtatgcattcgca
atgggatcaatgatatcagtgtactttctgacaagccacgatgaaattaaggacaagaca
aaaatatacgcactatgttttcttggattggctgtgttctcgctgctaattaatgttatc
cagcattataatttcgcctacatgggagagtacttgacgaagaggattagggagaggatg
ctttccaagatactcacttttgaagttgggtggttcgatgaggatgagaattctagtggt
gccatatgctctagactcgccaaggatgccaatgtggtgagatctttagtgggtgacagg
atagccctcatcgtacaaaccttctccgctgtagtggtcgcttgcaccatgggcttggtc
attgcatggaggcttgccattgtcatgatagccgtccagcccatcatcatagtttgctac
tacactcggcgggtcctactcaaaagcatgtccagcaaagccatcaaagcccaagacgaa
agcagtaaactcgctgctgaagctgttgctaaccttcgaactgtcactgccttctcatcc
caagaccgaatcctaaaaatgcttgataaggcccaagaaggtccacgactagagagcata
agacagtcgtggtacgcaggtgttgggcttggcgcctctcaaagcctcacaacttgcact
tgggctttagacttttggtacggtggcaaacttatctcccagggttccatcacggcaaaa
gctttgtttgagactttcatgatcttggtgagcacgggtcgtgttattgctgatgccgga
agcatgacctccgaccttgtcaagggctcagatgccgttgggtcagtctttgccgtttta
gaccgatacacaagaattgagcccacagaccctgaaggttaccatgccgagaagataacg
ggcaaagtggaaattcgtgatgtggactttgcatacccagctaggcctgacgtgatgatc
ttcaaaggcttctcgatggttatagaagctgggaaatcaacagcgttggtgggacaaagt
gggtctggaaaatcaactatcataggattaattgagagattttacgatccactcaaaggt
gcagtgaaaattgatggtagagatataaggtcattccatcttaggtccttaaggaagcac
attgcccttgttagccaagagccaacactatttgcaggcaccattggagagaacatcgca
tacggagcatcggataaagtcgatgaaacagagatcatagaggcttctagattagccaat
gctcacaatttcattgctggcctaaaggatggatatgacacttggtgtggagacaaaggg
gtgcagctctcggggggacagaagcaacgtattgcaatagctcgagccatattaaaaaac
ccgtctgtgctattgctagacgaggcgacaagtgcactagatagtcagtcggagaaagta
gtgcaagacgcgttggagaaggtgatggtgggtaggacgagcgtggtggtggcacataga
ttgagcaccataaaaaactgtaataagattgcagtattggaaaaggggagggtggtggag
atggggacgcattcatctttgttagagaagggccccaatggagcttactactcgctaatc
agtctccaaaggaccccgagtactgatattagccgccccttcaactga
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integrated database retrieval system
