Carya illinoinensis (pecan): 122302630
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Entry
122302630 CDS
T08745
Name
(RefSeq) denticleless protein homolog
KO
K11790
denticleless
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cill04121
]
122302630
Ubiquitin system [BR:
cill04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
122302630
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_EML
EIF3I
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF12
Beta-prop_SPT8
MIOS_WD40
Beta-prop_HPS5
Beta-prop_WDR11_1st
Beta-prop_Vps41
Beta-prop_Nup120_160
WD40_RFWD3
Beta-prop_WDR75_2nd
Ribosomal_L37e
Motif
Other DBs
NCBI-GeneID:
122302630
NCBI-ProteinID:
XP_042969906
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Position
3:complement(4161545..4166106)
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AA seq
510 aa
AA seq
DB search
MESSSSRSFFRNIRSRELSGFRVRKRPYISDAASDIIEIGAVTVEHCGDETPPLAISFCK
NIKNSHILAVSDEDGYVSLFDTRRKFSCSASHQENAEKAKVCDWVAHHNAVFDVRWIKED
AQILTASGDQTVKVWDVQEMKCIAALMGHTGSVKSIYSHPTNPDIIVSGSRDGSFALWDL
RCNSNSRSVQGELCLGSTAVVKGAHLPSRAKRIRRGKAASMSITSVLYLKDEVSIATAGA
VDSVLKFWDSRNLKSVVTQTCPHPQSTEKERRLHGISSLSQDLNGVFLSAACMDNRIYLY
NLLQLEKGPLRSFSGCRIESFYVKSAISPDATHIISGSSDGNAYIWQVNKPHEDPFALKS
HDGEVTAVDWCPFEDGQMATCSDDFTVRMWNTQNSICSSTGFPSSNRRRVMAIPSVECRK
LMVNEPSCPKEDPDSWFPSNEVLPQNNSSYSIIMPKISTPEGQKKRFFSGSELNEAFEKT
PEATVKSPSSVLNPPSSTKRTIRDYFHTAS
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggagagctcaagctcccgatcattctttcggaacatcagatctagagagctaagcgga
ttcagagtccgaaagcgaccgtatattagcgacgccgcatcagatatcatcgaaattggg
gctgtgactgttgaacactgcggcgatgagactccgccgttggccatctcattctgcaag
aatattaagaattcgcacatccttgccgtgtccgatgaagacgggtacgtgagcttgttc
gacactcgccgcaagttctcttgctccgcatctcaccaagaaaacgcagagaaagccaag
gtttgcgactgggtcgcgcatcacaatgctgtgttcgatgtacgttggattaaggaagac
gctcaaattctgacggcttctggtgatcaaaccgtgaaagtatgggatgtccaggaaatg
aaatgcattgcagcattgatggggcacactggaagtgtaaagtctatatattctcatcca
accaatcctgatataattgtctccggttcaagagatggctcctttgctctttgggacttg
agatgtaattctaattccagaagtgttcagggggagctttgcttaggttcaactgctgtg
gttaaaggagcacatcttccctctcgagcaaaacggattaggcggggcaaggcagcttcc
atgagcattacatcggttctttatctcaaagatgaggtttcaattgctaccgcgggagca
gtggacagcgttttgaagttctgggatagcagaaatttgaaaagtgtggtaacacagaca
tgccctcatccccagtcaaccgaaaaggaaagaagattacatggtatatctagcttgtcc
caagatttgaatggagtgtttctttcagccgcatgcatggacaatagaatatacttgtac
aatttacttcagcttgaaaagggacctttgagatctttctctggatgccggatagaatcg
ttttatgtaaagtcggcaatcagccctgatgcgactcacataatcagtggttctagtgat
ggaaatgcctatatttggcaggtgaacaaaccgcatgaggatccctttgcattgaaaagc
catgatggagaggtcacagcagtagattggtgtccttttgaggatgggcagatggcaact
tgttcagatgatttcacggttcgcatgtggaacacccagaacagtatttgctcgagcaca
ggattcccatcttccaatcgaaggagagtaatggcaatccctagtgtggaatgtagaaag
cttatggtaaatgaaccaagttgtcctaaagaggatccagacagttggtttccttccaat
gaagtattaccccaaaataactcatcctattcaatcatcatgcccaaaatcagcactcct
gagggccagaagaaaaggtttttctcgggttctgagttaaatgaggcatttgagaaaacc
cctgaagctacagtgaagagcccatcttctgtcttgaaccctccttcctctacaaaacga
acaatccgagattactttcatacggcttcataa
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