KEGG   Carya illinoinensis (pecan): 122302630
Entry
122302630         CDS       T08745                                 
Name
(RefSeq) denticleless protein homolog
  KO
K11790  denticleless
Organism
cill  Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:cill00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cill04121]
    122302630
Ubiquitin system [BR:cill04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     122302630
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_TEP1_C Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 Beta-prop_EML EIF3I Beta-prop_SCAP Beta-prop_DCAF4 Beta-prop_WDR90_POC16_2nd Beta-prop_DCAF12 Beta-prop_SPT8 MIOS_WD40 Beta-prop_HPS5 Beta-prop_WDR11_1st Beta-prop_Vps41 Beta-prop_Nup120_160 WD40_RFWD3 Beta-prop_WDR75_2nd Ribosomal_L37e
Other DBs
NCBI-GeneID: 122302630
NCBI-ProteinID: XP_042969906
LinkDB
Position
3:complement(4161545..4166106)
AA seq 510 aa
MESSSSRSFFRNIRSRELSGFRVRKRPYISDAASDIIEIGAVTVEHCGDETPPLAISFCK
NIKNSHILAVSDEDGYVSLFDTRRKFSCSASHQENAEKAKVCDWVAHHNAVFDVRWIKED
AQILTASGDQTVKVWDVQEMKCIAALMGHTGSVKSIYSHPTNPDIIVSGSRDGSFALWDL
RCNSNSRSVQGELCLGSTAVVKGAHLPSRAKRIRRGKAASMSITSVLYLKDEVSIATAGA
VDSVLKFWDSRNLKSVVTQTCPHPQSTEKERRLHGISSLSQDLNGVFLSAACMDNRIYLY
NLLQLEKGPLRSFSGCRIESFYVKSAISPDATHIISGSSDGNAYIWQVNKPHEDPFALKS
HDGEVTAVDWCPFEDGQMATCSDDFTVRMWNTQNSICSSTGFPSSNRRRVMAIPSVECRK
LMVNEPSCPKEDPDSWFPSNEVLPQNNSSYSIIMPKISTPEGQKKRFFSGSELNEAFEKT
PEATVKSPSSVLNPPSSTKRTIRDYFHTAS
NT seq 1533 nt   +upstreamnt  +downstreamnt
atggagagctcaagctcccgatcattctttcggaacatcagatctagagagctaagcgga
ttcagagtccgaaagcgaccgtatattagcgacgccgcatcagatatcatcgaaattggg
gctgtgactgttgaacactgcggcgatgagactccgccgttggccatctcattctgcaag
aatattaagaattcgcacatccttgccgtgtccgatgaagacgggtacgtgagcttgttc
gacactcgccgcaagttctcttgctccgcatctcaccaagaaaacgcagagaaagccaag
gtttgcgactgggtcgcgcatcacaatgctgtgttcgatgtacgttggattaaggaagac
gctcaaattctgacggcttctggtgatcaaaccgtgaaagtatgggatgtccaggaaatg
aaatgcattgcagcattgatggggcacactggaagtgtaaagtctatatattctcatcca
accaatcctgatataattgtctccggttcaagagatggctcctttgctctttgggacttg
agatgtaattctaattccagaagtgttcagggggagctttgcttaggttcaactgctgtg
gttaaaggagcacatcttccctctcgagcaaaacggattaggcggggcaaggcagcttcc
atgagcattacatcggttctttatctcaaagatgaggtttcaattgctaccgcgggagca
gtggacagcgttttgaagttctgggatagcagaaatttgaaaagtgtggtaacacagaca
tgccctcatccccagtcaaccgaaaaggaaagaagattacatggtatatctagcttgtcc
caagatttgaatggagtgtttctttcagccgcatgcatggacaatagaatatacttgtac
aatttacttcagcttgaaaagggacctttgagatctttctctggatgccggatagaatcg
ttttatgtaaagtcggcaatcagccctgatgcgactcacataatcagtggttctagtgat
ggaaatgcctatatttggcaggtgaacaaaccgcatgaggatccctttgcattgaaaagc
catgatggagaggtcacagcagtagattggtgtccttttgaggatgggcagatggcaact
tgttcagatgatttcacggttcgcatgtggaacacccagaacagtatttgctcgagcaca
ggattcccatcttccaatcgaaggagagtaatggcaatccctagtgtggaatgtagaaag
cttatggtaaatgaaccaagttgtcctaaagaggatccagacagttggtttccttccaat
gaagtattaccccaaaataactcatcctattcaatcatcatgcccaaaatcagcactcct
gagggccagaagaaaaggtttttctcgggttctgagttaaatgaggcatttgagaaaacc
cctgaagctacagtgaagagcccatcttctgtcttgaaccctccttcctctacaaaacga
acaatccgagattactttcatacggcttcataa

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