Carya illinoinensis (pecan): 122302645
Help
Entry
122302645 CDS
T08745
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00040
Pentose and glucuronate interconversions
cill01100
Metabolic pathways
Module
cill_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122302645
Enzymes [BR:
cill01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
122302645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
AbiEi_3
NosD
Motif
Other DBs
NCBI-GeneID:
122302645
NCBI-ProteinID:
XP_042969953
LinkDB
All DBs
Position
1:complement(39494774..39497643)
Genome browser
AA seq
432 aa
AA seq
DB search
MADNNAAGNWASVHATILILCFAIACCCKAKGMSHALVDTFLGANLRRITYDIRPGLNHE
KVFNVLHFGANPDGRKDSTQPFIRAWRAACGFKGRSSLLIPGGTFLLSEIVFAGPCSGPS
PTIVQVIGTLKATTDIREYSSSEWVLFQSISGLVIKGSGTFDGQGGAVWKYDCKDNKNCV
QLPSNIKFNKVTNGVLQGITSLNSKGVHVFITQCEDIRVHNIRVIAPGDSPNTDGIHVSH
SNNVRIAETIIRTGDDCVSMIQGATNVAINKLTCGPGHGISVGSLGKYRHEEDVRGIVVK
NCTLSGTDNGVRIKTWPGSDSSSASGMLFQDIIMNNVKNPIIIDQRYCDRSSKCTKEPSR
VRISNVYYVNIKGTSSSAVAVNLMCSKQFPCQDVHFYNIDLRYELKGMGASTATCANAVV
RYGGRQNPPPCK
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaataatgcagcaggaaactgggcttccgttcacgccaccattctgattttg
tgctttgcaattgcctgctgctgcaaggcaaagggcatgtcgcatgcacttgttgatact
ttcctgggtgctaacttacgtcggattacttacgacattcggcctggtcttaaccatgag
aaagtcttcaacgtattacacttcggtgccaatcctgacggtcgaaaagatagcacccag
ccgttcataagagcatggcgtgctgcatgcggcttcaagggaaggtcgagtctactaatc
cccggagggactttcttactatctgagattgtgtttgcagggccatgcagcggcccatct
cccacaatagttcaagttatagggacattaaaagcaacaacggatatcagagaatactct
tcctctgaatgggtcttgtttcaatccatcagtggcttggtaattaaaggaagtgggact
tttgatgggcagggtggtgctgtttggaaatacgactgtaaggataacaaaaactgcgtc
caactcccatcgaacattaagttcaacaaggtcaccaatggagtcctgcagggcatcact
tcccttaatagcaaaggggttcacgtattcatcactcaatgcgaggacatcagggtacac
aacattcgtgtaattgcccccggagatagccccaacactgatggcatccatgttagccat
tccaacaacgtgcgaattgctgaaaccatcatccgcactggggatgattgcgtctctatg
atccagggagccacaaacgtcgcaatcaacaaattaacctgtggacctggtcatggcatt
agtgtgggtagcctcggcaagtaccgtcacgaggaggatgtgagaggcatcgttgtgaaa
aattgcaccttgtctggcacagataatggggttagaatcaaaacatggccaggatctgat
tcaagttcagcgtctggcatgcttttccaggacatcattatgaacaatgtgaagaacccc
atcattatagaccagcgatactgcgatagatcaagcaaatgcacgaaagagccatcgcgt
gtaaggatcagcaacgtttattacgtaaacattaagggaacctcaagctcagcagtggca
gtgaatctgatgtgcagcaagcagtttccttgccaagatgttcacttctacaacatcgat
ttgaggtacgagctgaagggaatgggtgccagtactgctacatgtgccaatgcagtagta
aggtatggtggaagacaaaacccaccaccttgcaaatag
DBGET
integrated database retrieval system
