Carya illinoinensis (pecan): 122302679
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Entry
122302679 CDS
T08745
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00040
Pentose and glucuronate interconversions
cill01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122302679
Enzymes [BR:
cill01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
122302679
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Gene cluster
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
122302679
NCBI-ProteinID:
XP_042969999
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Position
3:complement(4535696..4537514)
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AA seq
405 aa
AA seq
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MAHLSIFFLSFFYFLCCNPGFVFSSPVQDPDLVVQEVHRSINASRRNLAYLSCGTGNPID
DCWRCDPNWEKNRQRLADCAIGFGKNAIGGRNGRIYVVTDSGNDDPVNPKPGTLRHAVIQ
DEPLWIIFQRDMVIKLEQELVMNSFKTIDGRGASVHIAGGPCITIHYVSNIIIHGINIHD
CKQGGNANIRNSPHHSGWWTRSDGDGVSIFGGRHIWVDHCSLSNCHDGLIDAIHGSTAIT
ISNNYMTHHDKVMLLGHNDAYTQDKNMQVTVAFNHFGEGLVQRMPRCRFGYFHVVNNDYT
HWEMYAIGGSAAPTIYSQGNRFLAPDLRFRKEVTKHEDAPESEWRHWNWRSEGDLFLNGA
YFLQSGAGASSSYARATSLSARPSSLVGSMTRTAGALGCRKGSRC
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggcccatctttccattttctttcttagtttcttctattttctatgctgcaatccaggt
ttcgttttctcctctcctgtacaagaccctgatcttgtcgtccaagaagtgcacaggagc
atcaatgcctccaggaggaacttggcctatctctcctgcggaaccggaaaccccattgat
gattgctggaggtgcgatcccaactgggagaagaaccgccagaggttagccgactgtgcc
atcgggttcggaaagaatgccattggaggaagaaatggtcgcatctatgtggtcactgac
tccggcaacgatgaccccgtgaatcctaagcccggtactctacgacacgcagttatacaa
gatgagcctttgtggatcattttccaaagagatatggtgattaagctggagcaagagctt
gtcatgaactccttcaagaccatcgatggtagaggtgccagcgtccatattgccggtggg
ccatgcattactatacattatgtctctaacatcatcatccatggcatcaacattcatgac
tgtaagcaaggagggaatgccaatataaggaactcccctcaccattctggttggtggacc
agatcggacggtgatggagtgtccatctttggcgggaggcatatttgggtggaccattgc
tcactgtctaactgccatgatggcctcatcgatgccatccatggatccaccgccatcacc
atctccaacaactacatgactcatcatgacaaggtcatgcttttaggccacaatgacgcg
tacacacaagacaagaacatgcaagttactgtagcctttaatcactttggagaagggctg
gtacagagaatgccaaggtgtagatttgggtattttcacgtggtgaacaatgattacact
cactgggaaatgtatgccattggagggagcgctgcgcctacaatttacagccaaggcaac
agatttctggcacccgatttgaggtttagaaaagaggtgacaaagcatgaggacgcacca
gagagtgaatggaggcactggaactggaggtcggaaggggatttgttcttgaatggggca
tacttcctgcagtcgggcgcaggagcatcatccagctatgccagggcaactagcctgagt
gcaagaccatcttctctggtgggctcaatgaccaggactgctggtgcacttgggtgcagg
aagggttcccgctgctag
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