Carya illinoinensis (pecan): 122302810
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Entry
122302810 CDS
T08745
Name
(RefSeq) KH domain-containing protein At4g18375-like isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cill03019
]
122302810
Messenger RNA biogenesis [BR:
cill03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
122302810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
122302810
NCBI-ProteinID:
XP_042970168
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All DBs
Position
3:complement(5619642..5634614)
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AA seq
687 aa
AA seq
DB search
MDGNKRSFFKKTPSIQFKKRGDNKKGRWNNSSREQSSGNSQPVDTVYRILCPSRKIGGVI
GKGGSIVKALREETQAKITVADSVPGSDERVIIIYSSPKKISGKQNGKDSSGENELEPLE
PLCAAQDALLKVHDRIIEEDLFGGMTFDDDNDNSVVTARLLVPNHMVGCLLGKGGDVIQR
LRSETGANIRVLPADHLPACAMGTDELVQISGKPDVAKRALYEVSTQLHHNPRKDKSPLT
FSMPFGGQGFHPPGGPMPGMLPPGNPMWSHQDSSPHRMPPRPWVERYGNQHSGFEPMGFN
GVPPGAGAEASAEFSMKILCSAGRIGGVIGKGGFNVKQLQHETGGSIHVQDASTESDERV
IRVSAFEALWNPRSQTIDAILHLQNKVSEYSEKGNIITRLLVPSSKVGCILGQGGHVINE
MRRRTQADIRVYSKDDKPKCAAEDEELVQVSGNFGVAKDALAEIASRLRVRTLRDATAGA
ETAPVGPAQRYGHAGNMPSRGLPPSGTMGAGNSGRYDPLMFMLLKVEGHEYEPQSYTVPP
AAAGYPNINTALDVKISNIGSGGSNISNVGEVGGARVNYQDSQVGGSEGIAKIRGSEHSN
AAQSTLQSFMGSAGQSMNYQQNSYQNRNALHGSHQNMNAQQSYQGSHQNLNAQQSPYQLS
GQPGSYPNVSVPQAAYHNISAYQGYQY
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggatgggaacaaacgaagttttttcaagaaaacccccagcatccaatttaagaagaga
ggagacaacaagaaaggaagatggaataattcaagccgtgaacagtcttcagggaattct
caacctgtggacactgtctaccgtatactgtgtccttctagaaaaattggtggtgttatt
ggaaaaggtggcagcatagtcaaagccttgagagaagagacgcaggcaaagattacagtt
gctgattctgttcctggctccgacgagagagtgattattatatatagttctccaaagaaa
atttcaggtaagcagaatggtaaagattcatctggggagaatgaattggagcccttggag
cctctatgtgctgcccaggatgcccttttaaaagttcatgacaggattattgaggaggat
ctctttggtggcatgacatttgatgatgataatgataacagtgttgtcactgcacggctt
ttagttccaaatcatatggtaggatgtcttcttggcaaaggtggtgatgttattcaaaga
ttgcggagtgagacgggtgcaaatattcgtgttctccctgcagaccatcttcctgcatgt
gctatgggcaccgatgaattggtgcagatatctggaaaaccagatgtagcaaagagagcg
ctttatgaagtatcgactcaattacatcataatccacgcaaagacaaatctcctctgact
ttctctatgccttttggaggccaaggatttcatcctcctggaggtcccatgcctggtatg
cttccaccaggaaatccaatgtggtcccatcaggactctagtcctcaccgtatgcccccc
aggccgtgggtggagagatatggaaaccagcattctggatttgaaccaatgggtttcaat
ggtgttcctcctggagctggagctgaagcgtcagctgagttctctatgaaaattttatgt
tcagctgggagaattggtggggtgattggcaagggaggttttaatgtaaaacagttgcag
catgagacaggaggcagtatacatgttcaggatgcatcaaccgagtctgatgaacgtgtg
attcgtgtctctgcttttgaggctctctggaacccaagatcacagaccattgacgcaatt
cttcatcttcagaataaagttagtgaatactctgaaaaaggcaatattattaccaggctt
cttgtcccatcgagtaaggttggttgcattcttggacaagggggtcatgttattaatgag
atgagaaggagaacccaggcagacattcgagtttactccaaagatgacaagcctaagtgt
gccgctgaagatgaagagcttgtccaggtatctggaaactttggtgttgccaaagatgca
ctggcagagattgcatcaagactcagggtgagaactctgcgagatgcaactgccggagca
gaaactgctcctgttgggcctgcccagagatatggtcatgcaggaaacatgcctagtaga
ggactcccaccatctggcacaatgggagctggtaactctggtagatatgatccgctaatg
tttatgctcttgaaggttgaaggacatgaatatgaacctcagagctatacggttccgcca
gctgctgctggatacccaaatattaatactgctttggatgttaagatttcaaatattgga
tcaggagggagcaacatttccaatgttggtgaggttggtggagcaagagtgaattaccaa
gactctcaagttggtggctccgaaggtattgccaagatccggggttctgagcattcaaat
gcagcacagagtactcttcagtctttcatgggttctgctggacaaagtatgaattatcag
cagaactcctaccagaataggaatgccctgcatggctcccaccaaaacatgaatgctcag
caaagctaccaaggctcccaccagaacctgaacgcccagcaaagcccctaccaattgagt
ggtcagccaggatcctaccccaacgttagtgtacctcaagccgcataccacaacatcagt
gcgtatcaaggttaccagtactaa
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