Carya illinoinensis (pecan): 122302866
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Entry
122302866 CDS
T08745
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 10
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122302866
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cill04121
]
122302866
Enzymes [BR:
cill01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122302866
Ubiquitin system [BR:
cill04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
122302866
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sina_RING
Sina_ZnF
Motif
Other DBs
NCBI-GeneID:
122302866
NCBI-ProteinID:
XP_042970248
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Position
3:6178077..6181269
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AA seq
367 aa
AA seq
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MAKFSLDRDEDGEGPSSPEPKRLRISVQSDVAGRDNQEQYEEEEGKESDEDEGEDEIYEE
EDSEEDASEEVEEEEISEEEAQRWQEEDSSVSVGPRSNGGGQLCRDGSITVTLTDPEVLD
CTICFEPLSCPVFQCENGHIACSSCCIRLLNKCPSCSWPIGYNRCRSIEKVLEAVKISCP
NTGCKEAVSYSKKNEHGKTCMYAPCSCPLSNCNFIDSYKQLYLHFSRKHPSSAVGFLYDC
MFSISLNVDEKFIVLREQYDGVLFVLNNSIELLGNILAISCIGPCSSTRGFVYTLLARAH
GDILRLQSSTKYIQQRVDDPPSTCFILIPSDFFVSGQLKLDVRIQQNNAAAAAAAASTCD
QRRIGAI
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaattttcgctggatagagatgaagacggtgaaggcccaagtagcccggagccg
aagcgactcagaatctctgtccaaagcgacgtcgcaggtcgagacaaccaagaacaatac
gaagaggaagaaggtaaggaatctgacgaagatgaaggagaagatgaaatttacgaagaa
gaagatagtgaagaagatgcttctgaagaagtagaagaagaagaaatttctgaagaagaa
gcccaacggtggcaagaagaagactcttccgtgtctgtgggacccagatccaatggtggc
ggccaattgtgtcgtgatggatccattaccgtaacccttaccgacccggaagttttggat
tgcactatttgcttcgaacctttgtcctgtcccgtcttccagtgcgagaatgggcatata
gcttgctcttcctgctgcatcagacttttgaataaatgcccctcatgctcttggcctatt
ggctacaaccgatgccgatccattgagaaggttctagaagcagttaaaatttcatgccca
aacactggatgcaaagaagcagttagttacagcaagaaaaatgaacatgggaagacatgc
atgtatgcaccttgttcatgccccctttcaaattgcaactttattgactcatacaagcag
ttatacctacacttcagcaggaaacatccaagctctgcagtaggcttcctctatgactgc
atgttctctatttcgttaaatgtcgatgaaaaatttattgtccttcgagaacagtatgac
ggggttttatttgtcctcaacaatagcattgagcttctggggaatatattggcaattagt
tgtattgggccctgctcatcaacaagagggttcgtttacactcttctggctagagcgcat
ggagacatcctccgattacaatcttcgacaaagtacattcaacagcgggtggatgatcct
ccctcgacgtgtttcattctaattccatctgatttttttgtttctggccagctcaagttg
gacgtccgcatccaacaaaataacgctgctgctgctgctgctgctgcttctacatgcgac
cagagaagaattggtgctatttaa
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