Carya illinoinensis (pecan): 122302944
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Entry
122302944 CDS
T08745
Name
(RefSeq) phytoene synthase 2, chloroplastic
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00906
Carotenoid biosynthesis
cill01100
Metabolic pathways
cill01110
Biosynthesis of secondary metabolites
Module
cill_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
122302944
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
cill01006
]
122302944
Enzymes [BR:
cill01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
122302944
Prenyltransferases [BR:
cill01006
]
Terpene biosynthesis
Squalene/phytoene synthase
122302944
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
122302944
NCBI-ProteinID:
XP_042970360
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All DBs
Position
3:7141202..7146668
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AA seq
435 aa
AA seq
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MSVALLWIVTPSIEVSNSVGFFNSVRDGNRLLDPSISISRYWGSTRAKKGRKEKWNPCSV
STDLKYSGVGGSGLDSGSNFPVLSSMVANPAGELAASSEQKVYDVVLKQAALVKKQLRSS
GDLDVKPDIALPGTLSLLSEAYDRCGEVCAEYAKTFYLGTLLMTPERRRAIWAIYVWCRR
TDELVDGPNASHITPTALDRWESRLEDLFRGRPFDMLDAALSDTVAKFPVDIQPFKDMIE
GMRMDLRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGIAPDSQATTEDVYNAALALGIAN
QLTNILRDVGEDARRGRVYLPQDELNQAGLSDEDIFAGKVTDKWRNFMKHQIKRARMFFD
EAEKGVTELSAASRWPVWASLLLYRQILDEIEANDYNNFTKRAYVSKGKKLLALPIAYTK
SLVPPSRTSSLLTKA
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtagcattattatggattgtcaccccaagcatagaggtatccaactccgttggg
ttcttcaattcggtcagagatggaaaccggcttttagatccatcaatctctatatcccga
tattggggatcaactagagcgaagaaaggtaggaaagagaaatggaatccttgctctgtt
agtacagatttgaagtattcgggcgttggtggctcaggcttagacagtggaagcaacttc
cctgtactatcaagcatggtagcaaaccctgcgggagaattggccgcgtcatcggagcag
aaggtttacgatgtggtgctaaagcaggcagctctggttaaaaagcagttgaggtctagt
ggtgatcttgatgtaaagccggatattgctcttcctgggacactgagcttgttaagcgaa
gcttatgatcgttgtggagaagtttgcgcagagtatgcaaagacattttacttgggtact
ctgctaatgacccctgaaaggcgaagggctatctgggcaatatatgtgtggtgtaggagg
acagatgagcttgtcgatgggccaaatgcttcgcatataacaccaacagctttggatagg
tgggagtcacggttggaagatctttttcgaggccgtccatttgacatgcttgatgctgct
ttatcagatacagtcgccaaattccctgttgatatccagccattcaaggatatgattgaa
ggaatgagaatggacctaaggaagtcaagatacaaaaattttgatgaactctatctctat
tgttattatgttgctgggacagttggattgatgagtgttccagttatgggtattgcacct
gattcgcaagcaacaacagaggatgtatataatgctgccttggcattggggattgcaaat
cagcttacaaacatactaagggatgttggagaagatgctagaagaggtagggtttatcta
ccacaggatgagcttaatcaggcagggctttcagatgaagacatatttgctggaaaggtg
acagacaaatggagaaacttcatgaagcatcaaataaagagggcaaggatgttctttgat
gaggcagaaaagggggtgacagaactgagtgcagctagtagatggccggtatgggcgtcc
ttgttattgtaccgccaaatattggatgagattgaagcaaatgactacaacaacttcacc
aagagggcttatgtaagcaaaggcaagaagttacttgctttgccgattgcatacacaaaa
tctcttgttccaccatcaagaacatcatctctgttgaccaaggcatga
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