Carya illinoinensis (pecan): 122302972
Help
Entry
122302972 CDS
T08745
Name
(RefSeq) trans-cinnamate:CoA ligase, peroxisomal-like
KO
K23618
acyl-activating enzyme 11/12 [EC:
6.2.1.2
6.2.1.-]
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cill01004
]
122302972
Enzymes [BR:
cill01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.2 medium-chain acyl-CoA ligase
122302972
Lipid biosynthesis proteins [BR:
cill01004
]
Acyl-CoA ligase
Short/medium chain acyl-CoA ligase
122302972
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
122302972
NCBI-ProteinID:
XP_042970400
LinkDB
All DBs
Position
3:7382058..7384206
Genome browser
AA seq
582 aa
AA seq
DB search
MDQLPKCGANYAPLSPITFLNRASKFYANRTSVIYERTRFTWQQTYERCCRLASSLRSLN
IVKNDVVSVLAPNIPAMYEMHFAVPMAGAVLNTINIRLDSKTIATILRHSEAKVFFVDCQ
YVPLAREALRLLMDQTKDSRVPESSIPLVIVIDDIDSPTGVRLGELEYEQLVHKGNPRYV
PGDLEDEWDPIALNYTSGTTSEPKGVVYSHRGAFLSTLSLVLGWEMGSEPVYLWTLPMFH
CNGWTFTWGIAARGGTNVCLRNTAASDIYRSIAMHKVTHMCCAPIIFNVLLQAEPKERGQ
KITPPVQILTGGAPPPAALLEKIEPLGFHVTHAYGLTEATGPALVCEWQAKWNQLPRDDQ
AKFKARQGISILTLADVDVKDLKTMASVPHDGKTMGEIVLRGSSIMKGYFKDPKATSKAF
KDGWFLTGDVGVVHPDGYLEIKDRSKDVIISGGENVSSVEVESVLYKHPRVLEAAVVAMP
HPHWGESPCAFVTLSKNSAVGTDVDVSEAEIISYCRKNLPHFTVPKKVIFLAELPKNSTG
KILKNELRVKAKHFVVSDNHSEKSNIQAPQYGEQILQALSRL
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggatcagttaccaaaatgtggagctaattatgcccctctctcccctataactttctta
aacagagcctctaagttttatgccaatcgtacctctgtgatatatgagcgtacccgcttc
acatggcagcaaacgtacgagcgttgctgccgccttgcttcctctctccgttcccttaac
attgtcaagaacgatgttgtatctgtgttggctccaaacattccagccatgtatgagatg
cattttgcagtgccgatggcaggggctgtgctcaacaccattaatatccggctcgattct
aaaaccatagccaccattctccgacactctgaagccaaggtcttctttgtggactgccaa
tacgtgcccctggcacgcgaggctctccggttactcatggatcaaacaaaggattctcgg
gtaccggagtcgtccatccccttggtgattgtcatcgatgacattgactcgcctacaggc
gtccgcctaggcgagttggagtacgagcaactggtccacaagggcaatcccaggtatgtt
cccggtgacctcgaggatgagtgggatccgattgctctgaattatacgtcaggaacaaca
tcagaacccaaaggagtggtgtacagccacagaggagctttccttagcaccctgagccta
gttctcgggtgggaaatgggaagcgaacctgtctatctgtggacgcttcccatgttccat
tgcaacgggtggacctttacttggggcatcgccgcccgcggcggcaccaacgtgtgcctg
cgcaacactgcagcctcagacatctatcggagcatcgccatgcacaaggtcacacacatg
tgctgtgcacccatcattttcaacgtcctccttcaggcagaaccgaaggaacgaggccag
aagataacgcctccagtccaaatactcaccggaggagcgcccccgccggcagccctgctt
gaaaaaatcgagccgcttggattccacgtcacccatgcttatggcctgacagaagcaacc
ggaccggcactcgtgtgcgaatggcaggccaaatggaatcaactgccgcgcgatgatcag
gccaaattcaaggcacggcaaggtatatccatactaacgttggctgacgttgacgtaaag
gatttgaaaaccatggccagtgtgccccacgatggcaaaactatgggggagatagtcctg
cgtgggagcagcatcatgaagggctacttcaaggacccaaaagccacatccaaagcgttc
aaggatggctggttcttaacaggagatgtaggggttgtacatccagatgggtatctggaa
atcaaggacaggtccaaggacgtgatcatatctggaggtgaaaacgtcagcagcgtcgaa
gtggagtcggtactgtataagcacccaagagtgctggaagccgcggtggtggcaatgccg
caccctcactggggagagagcccctgcgcttttgtcaccctcagtaagaactccgccgtc
ggaaccgacgtcgacgtgagtgaggcagagataatctcctattgcaggaaaaatcttccc
catttcacggttccaaagaaagtgatattcttggccgagctgccaaagaactcaacagga
aagattctgaaaaacgaactgagggttaaagcaaagcacttcgttgtctccgataatcat
tccgaaaagtccaatatccaagcccctcagtatggcgagcagattctgcaggccttatcc
cgtctctga
DBGET
integrated database retrieval system
