Carya illinoinensis (pecan): 122302973
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Entry
122302973 CDS
T08745
Name
(RefSeq) ras-related protein Rab5
KO
K07887
Ras-related protein Rab-5A
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04144
Endocytosis
cill04145
Phagosome
cill04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122302973
04145 Phagosome
122302973
04148 Efferocytosis
122302973
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cill04131
]
122302973
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cill04147
]
122302973
04031 GTP-binding proteins [BR:
cill04031
]
122302973
Membrane trafficking [BR:
cill04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
122302973
Endosome - Lysosome transport
122302973
Exosome [BR:
cill04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122302973
Exosomal proteins of other body fluids (saliva and urine)
122302973
Exosomal proteins of colorectal cancer cells
122302973
Exosomal proteins of bladder cancer cells
122302973
GTP-binding proteins [BR:
cill04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
122302973
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
MMR_HSR1
Gtr1_RagA
RsgA_GTPase
AAA_16
TsaE
ABC_tran
Motif
Other DBs
NCBI-GeneID:
122302973
NCBI-ProteinID:
XP_042970401
LinkDB
All DBs
Position
3:complement(7396941..7405624)
Genome browser
AA seq
200 aa
AA seq
DB search
MARIGHNNLNAKLVLLGDMGAGKSSLVLRFVKGQFHEFQESTIGAAFFSQTLAVNDATLK
FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSTESFSRAKKWVQELQKQGNPNMVKAL
AGNKADLEDKRKVTAEEARVYAEENGLFFMETSAKNAINVNDIFYEIAKRLPRAQPAQNP
AGMVLVDRPTEGSQAASCCS
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggccaggatcggacacaacaatctcaatgcgaagctggttcttcttggagacatgggc
gctgggaaatccagcctcgtcttgcgctttgttaagggccaattccacgagttccaggaa
tcaaccataggagctgcattcttctcacaaacactggcagtgaatgatgcaacactaaag
tttgagatatgggacacagcaggacaagagaggtaccacagcttggctcccatgtattac
agaggtgctgctgctgccatcatcgtctatgatatcactagcactgaatcattttcacgt
gccaagaaatgggtgcaagagcttcagaagcaaggaaatcctaacatggttaaggctctt
gctgggaataaagctgacttggaagataagaggaaagtgactgctgaagaggcacgtgta
tatgctgaggaaaatgggctctttttcatggagacctctgccaaaaatgccatcaatgta
aatgatatattttacgaaatagctaaaaggttacctagagcacagcctgctcagaatccg
gcagggatggttcttgtggataggcccacagaaggatctcaagcggcatcttgctgttca
taa
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