Carya illinoinensis (pecan): 122303151
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Entry
122303151 CDS
T08745
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00040
Pentose and glucuronate interconversions
cill01100
Metabolic pathways
Module
cill_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122303151
Enzymes [BR:
cill01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
122303151
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Pectate_lyase_4
Motif
Other DBs
NCBI-GeneID:
122303151
NCBI-ProteinID:
XP_042970713
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Position
1:47502401..47504221
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AA seq
393 aa
AA seq
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MAKLTTVSSFLCLFFIISFICIQASNAANYNVVRFGAKPDGKTEATKAFLKTWESACNSA
TASTIYIPKGRFLLKATVFRGPCKNRITVRIDGTLVAPLDYRALGNSGYWILFIEVNGIS
IFGGKLDAKGAGFWACRRSGKNCPVGARSITFNWADNVVISGLTSINSQLSHLVINSCNN
VVVRNVKLIAPDQSPNTDGIHVQTSTGVTITGSTMQTGDDCISIGPGTKNLLMRDIKCGP
GHGVSIGSLGKELNEAGVQNVTLTNAVFTGSDNGVRIKSWARPSKGFVRNILFQNIVMRN
VESPIIIDQNYCPNNQNCPRQSSGVKISKVTYRNIRGTSATEEAVTFDCSPSTPCSGIRL
QDIKLTYMKMAATSSCKNIVGTSSGELMPQSCI
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggctaagcttactactgtatcttcctttctatgcctcttcttcattatatcctttatc
tgtatccaagcatcaaatgcagccaactataatgtggttcgctttggtgcaaagcccgat
ggaaaaactgaagcaacaaaagcattcctcaagacatgggaatcggcatgtaactcggcc
actgcatccacgatatacatcccaaaggggaggttcttgctaaaagccaccgtttttaga
ggcccgtgcaagaacagaatcacggttcggattgatggaacccttgtggcaccgttggac
tatcgtgcgcttgggaattcaggctactggattttgttcatcgaggtgaacgggatttct
atttttggcggcaagcttgacgcaaagggtgctggcttctgggcttgcaggagatctgga
aagaattgtccagttggtgctagatcgataacgttcaattgggcagacaacgtagtgatc
agtggcttaacatcgattaacagtcagcttagccaccttgtaatcaacagctgcaacaac
gtggtagtccgaaatgttaagcttattgctcccgaccagagcccaaacaccgatggaatt
catgtgcagacctcgaccggcgtcacgatcactggaagcaccatgcaaaccggagatgat
tgcatctcaatcggtcctggcaccaagaacttgttgatgagagacataaagtgtggccct
gggcatggcgtaagcatcggaagcttgggcaaggaattgaacgaagctggtgtccaaaac
gtgacgctaacgaacgcagtattcactggatcagataatggagtacggataaagtcatgg
gccaggcccagcaaggggtttgttcggaacattctcttccaaaacatcgtgatgaggaat
gttgagagccccatcatcattgatcagaactattgccccaacaaccaaaattgtcctcgc
cagagttctggagtgaagattagtaaagtgacgtacagaaatataagaggaacatcagcc
acagaagaggccgtgacattcgactgcagcccaagcactccatgcagtgggatcagattg
caagacatcaagcttacttacatgaaaatggcagcaacatcgtcgtgtaagaacattgtt
ggaaccagcagcggagaactcatgcctcagagctgtatatag
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