Carya illinoinensis (pecan): 122303213
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Entry
122303213 CDS
T08745
Name
(RefSeq) cyclic nucleotide-gated ion channel 18
KO
K05391
cyclic nucleotide gated channel, plant
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
122303213
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cill04040
]
122303213
Ion channels [BR:
cill04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
122303213
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
IQ_SCN5A_C
UBM
Motif
Other DBs
NCBI-GeneID:
122303213
NCBI-ProteinID:
XP_042970797
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Position
3:3497318..3501518
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AA seq
699 aa
AA seq
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MNRIISRSASRFRHFRRLATETEDHHEAHHILWRYQILDPGSDIVTHWNHIFLLTCLLAL
FIDPLYFYLPSVSGPACLTTETGLGILVTLFRSVTDLFYLMHMILKFRTAFVAPTSRVFG
RGELVMDAREIAMRYLKSDFIVDLAALLPIPQIVIWLVIPATRNSRVDHANNTLALFVLI
QYVPRLFLIFPLNQRIIKTTGVVAKTAWAGAAYNLLLYVLASHVLGAVWYLSSLGRQFSC
WNVECAKENALGVLPCLPSYLDCNSLGRAERQYWLNITHVLANCDAKNKDISFKFGMFAD
AFTNDVASSRFIEKFLYCLWWGLRNLSSYGQTLETTTFLGETLFCIFLSILGLVLFSFFI
GNMQTYLQSNTIRLEEWRIKKRDTEEWMRHRQLPPALQERVLRFVQYKWLATRGVNEESI
LLSLPLDLRREIQRHLCLALVRRVPFFSQMDDQLLDAICERLISSLNTQGTYFVREGDPV
NEMLFIIRGQLESSTTNGGRFGFFNSITLRPGDFCGEELLTWALMHNSSVNLPSSTQTVR
ALTEVEAFALRAEDLKFVASQFKRLHSKKLQHAFRYYSHQWRTWGACFIQAAWRRYWKKK
LINHLNREESLYYMSVPDQESNFNDDIADRSFEGERSSRNNENNFQHLGATILASKFAAN
TRRGANQKDLIGDPASTSLKMPQLFKPDEPDFSVDREEV
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgaatagaataatctccaggtcagcctcaaggttccgccacttcaggcgactcgccacc
gagaccgaggaccaccacgaggcccaccacattctatggcgctaccaaatcctcgacccg
ggcagcgatatcgtcacccactggaaccacatcttcctcctcacctgtcttctcgccctc
ttcatcgatcctctctacttttacctcccatccgtcagcggccctgcttgcttgaccacc
gaaacaggcttgggaatcctcgtcactctcttccgttccgtcaccgatcttttctacttg
atgcatatgatcttgaagttccggaccgcgtttgttgccccgacgtctagggtttttggg
cggggcgagctggttatggatgccagggaaatcgccatgcgttacttgaagtcggacttc
attgtcgatctcgctgcattgcttcctataccacagattgtcatctggttagtgattcca
gcaacacgaaactccagagttgatcacgccaacaacactcttgccctttttgttcttata
caatatgttcctagactatttcttatcttccccttgaaccagcgtattataaaaactact
ggggttgtcgccaagacggcttgggcaggagctgcgtacaatctccttctttacgtacta
gctagtcatgtattaggagctgtctggtatctatcatccttagggcgacagttttcctgc
tggaacgttgagtgtgcaaaggagaatgccttaggagttctgccttgcctccctagttat
ttagattgtaatagtttgggacgagctgaacgacagtactggttgaatatcactcacgtt
cttgccaattgtgatgcgaagaacaaagatatcagtttcaagtttggaatgtttgctgat
gcttttaccaatgatgttgcttcctcacgttttattgagaagttcttatattgtctttgg
tggggtttacgaaatctaagttcatatggacagactttggagacgaccacgtttcttggg
gagacattattttgcatttttctatccattctcggtttagtcctattctcgttttttatt
ggcaatatgcagacatatttacaatcaaatacgataagactagaagaatggaggattaag
aaaagagatacggaagagtggatgagacatcgccagttacctccagctttgcaagaacga
gttcttaggtttgttcagtataaatggctggccacaagaggagttaatgaagaatctata
ttgctttcattacccctagacctccgtcgtgaaattcaacggcatttatgtcttgccctc
gttcgccgtgtaccattcttctcacaaatggatgaccagcttcttgatgccatatgcgaa
cgccttatctcatccttgaacacacaaggcacctactttgttcgagagggtgatccagta
aatgagatgctttttatcattagaggacaactggagagctcaacaactaatggaggaaga
ttcgggttcttcaattccatcaccctcaggccgggtgacttctgcggtgaggaattactg
acatgggccttaatgcacaactctagcgtaaaccttccttcttcaacccaaactgttaga
gcccttactgaagttgaagcttttgcccttcgagctgaggacctcaaatttgttgcaagt
cagttcaagcgccttcacagcaagaaacttcagcatgcattcaggtactattcccatcaa
tggaggacgtggggtgcttgcttcatacaagctgcttggagaagatattggaagaaaaag
ttgataaatcacttgaatagggaggagagcctctactatatgtcagtccctgaccaagag
agcaacttcaatgatgatatagcagataggagttttgagggtgagagatcatcaaggaac
aacgaaaacaatttccagcatcttggtgccacaatcctggcatcgaagtttgctgcaaat
acaagaagaggtgctaaccagaaagatctcataggtgatcctgcttctaccagcttaaag
atgccccagctgtttaagccagatgaacctgatttctctgtagatcgagaggaggtttag
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