Carya illinoinensis (pecan): 122303361
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Entry
122303361 CDS
T08745
Name
(RefSeq) E3 ubiquitin-protein ligase RGLG3-like
KO
K16280
E3 ubiquitin-protein ligase RGLG [EC:
2.3.2.27
]
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cill04121
]
122303361
Enzymes [BR:
cill01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122303361
Ubiquitin system [BR:
cill04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122303361
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Copine
zf-C3HC4_3
zf-C3HC4
vWA-TerF-like
Prok-RING_4
zf-RING_2
Sina_RING
zf-RING_UBOX
zf-RING_5
zf-C3HC4_2
TerY_C
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
122303361
NCBI-ProteinID:
XP_042971049
LinkDB
All DBs
Position
3:complement(13561442..13570150)
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AA seq
417 aa
AA seq
DB search
MGNGESTYDDSHDEYQQHPPSFVGSSMNTYNQPHYDPRNDFQHHPPHVGSSVDTVDRHKQ
HPTHIADNFNSLEQVISSLREAGLESSNLILGIDFTKSNEWTGKYSFSRKSLHAIGSTPN
PYEQAISIIGRTLSPFDEDNLIPCFGFGDATTHDRHVFSFYPDHRQCNGFEEALARYRQI
VPHLKLAGPTSFAPIIDAAIDIVERTNGQYHVLVIVADGQVTRSPDTPPGRFSPQEKATV
ESIVAASQYPLSIILVGVGDGPWDAMKQFDDNIPQRSFDNFQFVDFTKVMSENTEASKKE
AEFALAALMEIPFQFRATQRLVNREPGAAPRTRPLPPPRGVIYHDNAVKSVPVPPVTDFK
TVEATAAQVEMVCPICLTNPKDMAFGCGHLMCQDCSVNLTSCPICRNPITTRLRVYS
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatggggaatcaacatatgatgattctcatgatgaatatcagcagcatccacct
tcttttgtaggaagttcaatgaatacttacaatcaaccacattatgatcctcgcaatgac
tttcagcatcatccacctcacgtgggaagttcagtggatactgtcgatcgacataagcag
caccctacacacatagctgataatttcaactctttagagcaggttatctcttcattaaga
gaagctggccttgaatcatcaaatttgatacttggtattgacttcacaaagagcaatgag
tggacaggcaagtattcattcagcaggaaaagccttcatgcaatcggcagcacacctaat
ccctacgagcaagcaatctctataattggccgcactttgtctcctttcgatgaagataat
ttgataccttgttttgggtttggcgatgcaacaacacatgatagacatgtgttcagcttt
tatcctgatcatcgacagtgcaatggttttgaggaagctcttgcacgttatagacagatt
gttccacacttaaagctggcaggtccaacctcatttgccccaataattgatgcagcaatt
gacattgtggagagaaccaatgggcaatatcatgttctagtcattgttgcagatggacag
gtgaccagaagtcctgatacaccacctggaaggttcagtccacaagaaaaagctactgta
gaatccatagttgctgctagccaatatcctctctcaattattttggttggagttggggac
ggaccctgggatgcaatgaagcaattcgatgataacattcctcagcgctcatttgacaat
ttccagtttgtcgacttcacaaaagtcatgtctgaaaacacagaagcatcaaaaaaggaa
gcggaatttgcacttgctgccctcatggaaattccatttcagttcagggcaacccaaaga
ctagtcaatcgagaaccaggagctgctccacgtacaagacctcttccgcccccacgtggt
gtgatttatcatgataatgcagtcaaatcagtcccagtcccgcctgtgacagactttaaa
acagttgaggcaacagcagctcaagtggaaatggtctgccctatttgcctgacaaaccct
aaggacatggcttttggatgcggtcatttgatgtgccaggattgcagtgtgaacctaaca
tcgtgccctatctgccggaatccgataacaacacgcctgagagtctatagctga
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