Carya illinoinensis (pecan): 122303418
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Entry
122303418 CDS
T08745
Name
(RefSeq) autophagy-related protein 13b
KO
K08331
autophagy-related protein 13
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
122303418
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cill04131
]
122303418
03029 Mitochondrial biogenesis [BR:
cill03029
]
122303418
Membrane trafficking [BR:
cill04131
]
Autophagy
Autophagosome formation proteins
ULK complex
122303418
Atg1 complex
122303418
Mitochondrial biogenesis [BR:
cill03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
122303418
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
122303418
NCBI-ProteinID:
XP_042971132
LinkDB
All DBs
Position
3:14570402..14577195
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AA seq
632 aa
AA seq
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MAPSHGSPHSEAAKMEQIVTEFFAKSLHIILDSRTSCMSSRSFRGEQIMSSPSSSSSSTS
SVRPRDKWFNLALRECPASLENLDLWRQSNPAPMVVDVVLLQRRLHWDPISFSPQRDLIR
NFSSEGYPYYWNSDQEEFRCEAHSEKIIERWVLRYESKKVKDNHSSGSRRSSNSTLHTLY
KKSILLLRSLYVTVRLLPAYKIFRELNSSGQIRTFSLTHRVSSSIEPFNPREETEMQRFG
FTPVETSSGRLCLSVLYRSSVLDISSESSTPISPQVIPDYVGSPLAEPLKRFPSLPVAGL
GTHGSPSSLPFSRQHSWSYDHYRASPSSVFFSPSPTHSETCASISNPSSHRFPPTSLPPH
PPETSVAYKNNTSFDEYHPSPTFSPSPSPSPPICIPWSHLSKGLLRSESAPVNIPIANLP
ALSNKQFLPPSPPIKSTRSGTLRMDNYVDPNQIGATVEQLWKDETRKYLASTSSPQISFS
RSSSRSFQDDFDDSEFSCPFDVDDDDMTHPGSRPGSFDQRGHLSEPLEPGGLFPIRKSQD
AAVGALVRMLKKAPPLRQESSSSVNVPQAAGPDIWSNSLDEHNQAVQHAASASITSSGLV
TLKTTADALEELQGYREEMKNLLLKQGCKSNK
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggcaccatctcatggtagtcctcactctgaagcggcaaaaatggaacaaatagtcact
gaattctttgccaaaagcctccacataattctcgattctagaacctcttgcatgtcctcg
cgcagttttaggggcgagcaaatcatgtcatccccatcatcctcctcatcgtctacgtcg
agtgtgaggccgagggataagtggtttaatttggctctaagggaatgccctgcttcgctt
gagaatcttgatctctggcgccagagcaatccagcacccatggtggttgatgtggttttg
ttgcagaggcgtcttcattgggatcccataagtttttcgcctcaaagggatctcattagg
aatttttcatccgaaggctatccgtattactggaattctgaccaggaggaattcaggtgt
gaggcacacagcgagaagatcatagagagatgggtcttgcgatatgagagtaagaaggtg
aaggataatcatagttcaggtagcaggaggtccagcaatagtactttgcatacattgtac
aaaaaatcgatattgcttttgaggtctttgtatgtgactgttaggcttctacctgcatat
aagatttttcgtgagcttaattcgtctggccagatacgaacatttagtctcacacaccgg
gtttcttcttctattgaaccctttaatcctagagaagagacagaaatgcagcgatttggg
ttcacccctgtggaaacttcttctggtaggctttgcctttcagtgttgtatcgctcatca
gtcttggatataagctctgaatcatcaactcctatttccccacaagttataccagattat
gtaggcagcccattggcagaaccccttaaaaggtttccatcgctacctgtggcaggtttg
gggactcatggctctccttcatctttgccattctcaaggcagcatagctggagttatgac
cactatagagcctcaccttcttcagtttttttctcaccttcacctacccattcagaaaca
tgtgcttccatttctaacccaagttcccaccgtttcccaccgacgagcttgcctcctcat
ccgcctgaaacatcagttgcttataagaataatacaagtttcgacgagtaccatccctct
cctaccttttccccctccccttccccatctccgccaatctgtattccgtggagtcatctg
tcaaagggtcttttaagatctgaaagtgccccggtaaacatacctattgctaatttgcca
gcattgtccaacaagcaatttttacctccatctccgcccattaaaagtacaaggtctggt
actttgaggatggataactatgtggatcctaatcagattggtgcaacagttgagcagttg
tggaaagatgagaccagaaaatatttggcatctaccagctcacctcagatttcattttcc
agaagctccagcaggtctttccaagatgattttgatgattctgagttttcttgccctttt
gatgttgatgatgacgatatgacacatcctggtagcaggcctggttcttttgatcagaga
ggacatctaagtgagccacttgagcctggaggattgtttccaataagaaaatcccaagat
gctgcggttggtgcacttgtacgcatgttgaagaaagccccacctctccgtcaagaatct
tccagttcagtaaatgtgccgcaagcggctgggcctgatatatggagcaacagcctcgat
gaacacaatcaagcggttcagcatgcagcttctgcaagcatcacgtcttctgggcttgtc
acgttgaagactacagctgatgcattagaagagctccagggttatagagaggagatgaag
aacctgttacttaagcaaggctgtaaatccaacaagtaa
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