Carya illinoinensis (pecan): 122303472
Help
Entry
122303472 CDS
T08745
Name
(RefSeq) chromatin assembly factor 1 subunit FAS2
KO
K10751
chromatin assembly factor 1 subunit B
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cill03036
]
122303472
Chromosome and associated proteins [BR:
cill03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
122303472
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
EIF3I
WDR55
Beta-prop_WDR75_1st
Beta-prop_WDR35_TULP_N
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
B-prop_COPA_B_2nd
Beta-prop_Vps41
Beta-prop_NUP159_NUP214
Beta-prop_SPT8
NBCH_WD40
Beta-prop_EIPR1
DUF4437
Motif
Other DBs
NCBI-GeneID:
122303472
NCBI-ProteinID:
XP_042971204
LinkDB
All DBs
Position
3:complement(16049795..16054819)
Genome browser
AA seq
452 aa
AA seq
DB search
MKGGTVQINWHDTKPVLTADFHPLSGILATGGADYDIKLWLINSGAAQTKGPTASYQNSL
SYHSSAVNVLRFSPSGEQLASGADGGELVIWKLHPTDTGQTWKVFKTLSFHRKDVLDLQW
SANGAFLISGSVDNSCIVWDMSKGSVHQILDSHSHYVQGVAWDPLAKYVASLSSDRTCRI
YINKPQAKTKGMEKINYVCQNVITKAEQPSVDDSKSVKNHLFHDETLPSFFRRLAWSPDG
SFLLVPAGSYKISPASETVNTAYIFSRKDLSRPALQLPGASKPIVVVRFCPVVFSLRGSN
PATHFKLPYRLIFAVATLNSLYIYDTESVPPIAILAGLHYAAITDITWSPEGHYLALSSQ
DGYCTLLEFEHDELGSPISLSEETKVTGDENRDPVQKPEEMIIDVTKSDAAAESTTSEPG
KNEGKLASPSSTSTPISNKPAKRRITPMAIDP
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaagggtgggacggttcagatcaactggcacgacaccaagccagtcctaacagctgat
ttccaccctctctccggcatccttgccaccggtggcgccgattacgacatcaagctctgg
ttaataaattcaggtgcagcgcagacgaaaggccccacagcttcctatcaaaatagcctt
tcttaccacagttctgctgtaaatgtccttcggttctctccttctggagaacaactcgca
tccggtgctgatggaggtgaactggtcatttggaagttacaccccacagacacaggtcaa
acatggaaggttttcaagactttatcatttcacaggaaggatgtcctggacctgcagtgg
tctgccaatggtgcatttcttatttctgggtctgttgataattcttgcatcgtgtgggat
atgagcaaaggttctgtccatcagatcttggattcccactcccattatgttcaaggtgtt
gcatgggatccacttgccaagtatgtggcttcccttagttctgatagaacttgccgtatt
tatattaacaaacctcaagcaaaaactaaaggcatggaaaagattaattatgtttgtcaa
aatgtcattacaaaggcagaacagccatcagtagatgattctaagtctgtaaaaaaccat
cttttccacgatgaaacgttgccatctttcttccgaagattagcctggtcacctgatggg
tcatttttacttgtgcctgcaggttcttacaagatttcacctgcatctgaaacagtaaat
acagcttacatattttccagaaaggatctctcgaggcctgctctacaacttccaggtgcc
agtaaacccatcgtggtggttcgtttctgtcccgtagtttttagcctccggggatctaat
ccagctacacactttaagctcccttatcgcctcatttttgcggttgctactttgaattct
ttatacatttatgacacggagagtgttcctccaattgcaatactggccggtcttcactat
gcagccataacggacattacgtggtcacctgaaggccattacttggcattatcctcccaa
gatggttactgtacgttactagaatttgagcacgacgaactgggatcgcccatctcttta
tcagaagaaacaaaagtcacgggtgatgagaatagggaccctgttcagaagccagaggag
atgataattgatgtaactaagagcgatgctgcagcagagagcactacatcagaaccagga
aagaatgaagggaaactagcatcaccaagctcaacaagtactcccatctcaaataaacca
gctaagaggcgtattactcccatggcaattgatccttga
DBGET
integrated database retrieval system
