Carya illinoinensis (pecan): 122303491
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Entry
122303491 CDS
T08745
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cill03041
]
122303491
Spliceosome [BR:
cill03041
]
Common components
Common spliceosomal components
General mRNP proteins
122303491
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
Motif
Other DBs
NCBI-GeneID:
122303491
NCBI-ProteinID:
XP_042971225
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All DBs
Position
3:complement(16389870..16411082)
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AA seq
559 aa
AA seq
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MDFDAYEYLEKTVEENEERDSKRQNKSREGSERSYRKRDVDDDDPASADGEDRKSKRSRG
DDENVSSKRERERSGHRDKDRHHRDSEREKDRERDRERERSGREKGKERERRERDKEKER
ERERREREREKERERKEREERESSRRSRSRSDRDRERERDLEMRESRRFKDKKEVVEPEA
DPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMS
VPMAIALSGQLLLGQPVMVKPSEAEKNLVQSTASGGGSGGLVGPYGAVDRKLYVGNLHFN
MTESQLRAIFEPFGPVELVQLPLDLETGHCKGFGFVQFAKLEDAKAAQSLNGKLELAGRT
IKVSSVTDHVGVQETGAKAADFDDDDGGGLSLNAQSRALLMQKLDRSGVATSIVGSLGVP
VLNGSAPNTQAFNLPANGQAAVSVPALPVQAIPTPAAEPVGTPSECLLLKNMFDPATETE
PDFDMDIKEDVEEECSKYGRVRHIYVDKNSAGFVYLRFETVEAAMAAQRAMHMRWFARRL
ITALFMEPHVYEATFNGGA
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggacttcgacgcttacgagtacttggagaagacagtggaggagaacgaagagcgagac
tcgaagaggcagaacaagagcagggagggcagcgagaggagctacagaaagagagatgtc
gacgacgacgatcctgcctccgctgacggtgaggaccgaaagagcaagaggtccagaggc
gacgacgagaacgtcagcagcaagcgcgagcgcgagcggtctggtcatcgcgacaaggat
cggcatcacagagattccgagagagaaaaggatcgagagcgggatcgagagcgagaacgg
agtggtagagagaaggggaaggagagagagagaagggagagagacaaggagaaggagagg
gagagagagaggagggagagggagagggagaaagaaagggagagaaaggagagagaagag
agagaaagttcgcggagaagcaggagtaggtcggaccgcgaccgagagagggaaagagac
ctagagatgagagaaagcaggagatttaaagataagaaagaagtggtggagccagaagcg
gatccagaaagggatcaaaggactgtttttgcataccagatgcctctcaaggcaactgag
agggatgtatacgagttcttttcaaaagcgggcaaggtgagggatgtccggctgatcatg
gacaggaattcaagacgatctaagggagttgggtatattgaattctatgatgcaatgtct
gtcccaatggcaattgctctctctggccaactacttcttggacaacccgttatggttaaa
ccttctgaggctgaaaagaacctcgttcaatctactgcttctggtgggggttcaggtggt
cttgtaggtccatatggagcagttgatagaaagttgtatgtcggtaacttacacttcaac
atgactgaaagccaacttagagcgattttcgaaccatttggtcccgtggagcttgtgcaa
cttcccttagaccttgagacgggacactgcaagggttttggttttgttcaatttgctaag
cttgaagatgcaaaagcagctcaatctttgaatggaaaattagaacttgctggtcgaacc
atcaaggtttcatctgttacagatcatgttggagttcaagaaactggagcgaaagcggca
gactttgatgacgacgatgggggtggtttgtctttgaatgctcaatcaagggcactgctt
atgcagaagctggatcgatccggtgttgccacaagtattgtggggtctctcggagttcct
gttttgaatgggtcagctccaaatacacaagcctttaatttacctgccaatgggcaagcc
gcagtttctgtcccagctcttccagtgcaagctatccctactccggctgcagaacctgtt
ggaacccccagcgagtgcttactattgaagaatatgttcgatcctgcaaccgagacagaa
ccagattttgatatggacattaaagaggatgtggaagaagaatgttctaaatatggccga
gtaagacatatttatgtggacaaaaacagtgctggttttgtgtatttgcgatttgaaact
gtggaagctgcaatggctgctcaacgtgcaatgcatatgagatggtttgcccgcaggttg
attacagcccttttcatggaaccccatgtatacgaggccacgtttaatggtggagcatga
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