Carya illinoinensis (pecan): 122303555
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Entry
122303555 CDS
T08745
Name
(RefSeq) geranylgeranyl pyrophosphate synthase, chloroplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00900
Terpenoid backbone biosynthesis
cill01100
Metabolic pathways
cill01110
Biosynthesis of secondary metabolites
Module
cill_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
122303555
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
cill01006
]
122303555
Enzymes [BR:
cill01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
122303555
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
122303555
2.5.1.29 geranylgeranyl diphosphate synthase
122303555
Prenyltransferases [BR:
cill01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
122303555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
UbiA
Motif
Other DBs
NCBI-GeneID:
122303555
NCBI-ProteinID:
XP_042971313
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All DBs
Position
3:complement(13015889..13017498)
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AA seq
324 aa
AA seq
DB search
MSCASVHIRTLTKEDSTLKEEGHESKSTFNFQTYMIQKAKSINQALDAAIPLKEGQKIQE
AMRYSLLAGGKRVRPVLCTAACELVGGSESMSMSAACAVEMIHTMSLIHDDLPCMDNDEL
RRGRPTNHKAFGEAIAVLAGDALLALAFEHIAVSTAGVPLTRVVRAIGELARSIGPEGLV
AGQVADMSCEGLPVSEVGLEQLEFIHLHKTAALLEGSVVVGAILGGGSNEEVEKLRRFAR
CIGLLFQVVDDILDVTKSSEELGKTAGKDLVAGKATYPKLMGIEKSREFAEKLNKEAQSW
LSGFDPEKAKPLLALANYIALRQN
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgagctgtgcgagtgtgcatatacgtaccctcaccaaggaagacagtactctcaaagag
gaaggacatgaatcaaaatccactttcaacttccaaacctacatgatccagaaagccaaa
tccatcaaccaagctctagacgccgctattccactgaaagagggccagaagatccaggag
gccatgcgctactcccttcttgccggtggcaagcgtgttcgccctgttctatgcactgct
gcctgtgagctcgttggcgggtccgagtccatgtcgatgtccgctgcatgtgctgtcgag
atgatacacaccatgtctctgatccacgacgatcttccttgcatggacaatgatgagctc
cgccgaggaaggccaacgaaccacaaggctttcggcgaagctattgcggttcttgccgga
gatgcgcttctggccttggcgttcgagcacatagcagtttccaccgcgggcgtgccgctg
acaagagtcgtccgcgcaatcggcgagttagccaggtcgatagggccggaagggcttgtt
gctgggcaggtagcagatatgagttgcgaagggctccctgtctctgaagtggggttagaa
cagctcgaattcattcatctgcacaagacagcagcattgctggaaggttcggtcgttgtg
ggagcgattctgggaggagggtcgaacgaggaggtagagaagttaaggaggtttgcaagg
tgtattgggttgctattccaggtggtcgacgacattcttgacgtgacaaagtcgtcggag
gaactggggaagacggccggaaaggacttggtagctggaaaggctacgtatccgaagcta
atggggatcgagaagtcgagggaatttgccgaaaaactgaacaaggaagctcagagttgg
ctatctggatttgatccggaaaaggccaaacccttgcttgctctggccaattacattgct
cttaggcaaaactag
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