KEGG   Carya illinoinensis (pecan): 122303567
Entry
122303567         CDS       T08745                                 
Name
(RefSeq) UBP1-associated protein 2B-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
cill  Carya illinoinensis (pecan)
Pathway
cill03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cill00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122303567
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cill03019]
    122303567
   03041 Spliceosome [BR:cill03041]
    122303567
Messenger RNA biogenesis [BR:cill03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     122303567
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     122303567
Spliceosome [BR:cill03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    122303567
SSDB
Motif
Pfam: RRM_1 RRM_7 Nup35_RRM_2 CR_prot_dom_plant PHM7_cyt Cut8
Other DBs
NCBI-GeneID: 122303567
NCBI-ProteinID: XP_042971323
LinkDB
Position
3:complement(17789969..17793282)
AA seq 396 aa
MAKTPKTKKRRLVKKFKKDDLQQEVDTTSTSNKKPKTEKPRKPQPRPPPPQQQSLNTDSD
SDSDSDSLPNLLELFSKGQLIDLISSTALQLPSLSRLVRQVADRDVSHRKIFVHGLGWDT
TRQTLLSAFEPFGEIEDCTLVTDKVSGKAKGYAFVLFKTRKSAQEALKNPTKKIGNRLAS
WQLASVGPGAPLQSQDVAARRIYVNNVPADTDAELLRQFFAKFGEIEAGPFGFDQNTGRS
RGFALFVYKSETGAKKVLEEPFRTFQGHRLHCQKATDGKGKNLVQGHVAAQPPLQAQRAP
VLAAAQNSSLFGQHLNLNPLYSGFIPSPEAGFLAPAGVLNPSVTTTQLGGNQSFFGAHGV
SGVGLQHLYPNMQVGQPSAGRNQGGGGSISGYPSYM
NT seq 1191 nt   +upstreamnt  +downstreamnt
atggcgaagacacccaaaaccaaaaagcgaaggcttgtaaaaaaattcaagaaagacgat
ctacaacaagaagtcgataccacctccacctccaacaaaaaacccaaaaccgaaaagccc
cggaaaccccaaccccggccaccaccaccacaacaacaatccctaaacactgattccgat
tccgactccgactccgactccctccccaacctcctggagctcttctccaaaggccagctt
atcgacctcatctccagcaccgcccttcagctcccctcactctcccgcctcgttcgccag
gtggccgaccgcgacgtctctcaccgcaagatcttcgtacatggccttggctgggacacc
actcgccagacattactctctgcctttgagccttttggagagatagaggactgcaccctc
gtcacggacaaggtcagtggaaaagccaagggatatgccttcgtcttattcaagacccgg
aagagcgcccaagaggctctcaagaaccctacgaagaagatcggcaacagactcgcctcg
tggcagctggcttccgtgggccctggggcaccattgcagtcccaggacgttgcggcgcga
aggatttacgtgaacaacgtgccggccgatacggacgccgagttattgagacaattcttc
gcaaaattcggggagatcgaggcgggtccatttgggttcgatcagaacaccggaagatcc
agaggctttgcgttgttcgtgtataagagcgagaccggtgccaagaaggttctggaagag
ccgtttagaacatttcaagggcaccgattgcattgccagaaggcaaccgatgggaagggc
aagaatctggtgcaggggcatgtggcggcacaaccaccgttacaagcgcagcgagcaccg
gttttggcagcggcacagaattcgtcgctgtttgggcagcatctgaacctgaacccattg
tacagcgggttcattccgagtccagaagccgggttcttggcacctgcaggggtgttgaac
ccgagcgtgacgaccacccagttagggggaaatcagtctttcttcggggcccacggcgtg
tcaggtgtgggtctgcagcacttgtatccaaacatgcaggtgggacagccgagtgccggt
aggaatcagggcggtggtggctctatcagtggatacccttcatatatgtga

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