Carya illinoinensis (pecan): 122303573
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Entry
122303573 CDS
T08745
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1B-like isoform X1
KO
K15559
regulator of Ty1 transposition protein 103
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cill03021
]
122303573
Transcription machinery [BR:
cill03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
122303573
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
CTK3
UPF0242
CCDC84
TEX13
Motif
Other DBs
NCBI-GeneID:
122303573
NCBI-ProteinID:
XP_042971337
LinkDB
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Position
3:complement(17840835..17849315)
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AA seq
522 aa
AA seq
DB search
MNSVFTEQILADKLSKLNSTQQCIETLSHLCIFHRSKAELIVATWDKQFHSSQMVQKVPL
LYLANDILQNSKRKGNEFVTEFWKVLPGALKDVIEKGDDHGKNVVSRLVAIWEERRVFGS
RGRSLKDVMLGEELPQPLELSKKRSRSVRIVKRDSRSIRTKLSIGSMAEKIVSAFHLVLS
ERPNEDAEMSKCKSAVHRVRKMEKDVDISCQNAKDPKRKDLSKELEEEENILKQCIEKLK
SVEASRVALVSQLKEALHEQESELENVRTQMQVAQAQAEEASNMRKRVDDEDYISKPSTA
TTTTDANTKAEQTPRKSAAAIAAEVADKLAASSSSQLIMTSVLSTFAAEEAKNAGLTQVS
APSNSLTSMPNSSGSESMAKPEKSMPVSDPKAFMSAQPFTVPPNHSYQSVLVPQSAMQNH
APTSQAQYHILPNPSQQYLQPSGGIMAPYGYNSLVPLPPGPPPPPPHMVSPMVPMTLQVT
QQQTIPLTQQPPAPPSFRPLQPPGMVFYDNSDAFNTRNQRIW
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgaatagtgtattcactgagcagatacttgcagataagctctccaagctcaacagcacc
cagcagtgcattgaaactctgtcacatttgtgtatatttcaccggagcaaagcagaactg
attgtcgcaacatgggataaacagttccacagttcacagatggttcagaaagttcccctt
ttgtatcttgcaaacgacattctacagaatagcaagcgcaaaggaaatgaatttgttact
gagttttggaaggttctccccggtgcactcaaagacgttattgagaaaggggatgatcat
ggaaaaaatgtggtctctagattggttgctatatgggaagaaaggagagtgtttgggtcc
cgtgggcggagcctcaaagatgtaatgcttggagaagaactgcctcaaccattggagtta
agcaaaaaaaggtcgcgttcggtcagaattgtaaaaagggattcacgctccattagaacg
aaattgtccattggaagtatggccgagaaaatagtgtcagcatttcacttggtactcagt
gaacgtcccaatgaagatgcagaaatgagtaaatgcaagtctgcggttcaccgtgtgagg
aagatggagaaagatgttgatatttcctgtcaaaatgctaaagatccaaagcggaaagat
ctgtccaaagaactagaggaggaagaaaatattttgaaacagtgcattgaaaaacttaaa
tcagttgaagcaagtagagtagcgcttgtatctcagttaaaagaagcgctccatgaacag
gagtccgaactggaaaatgtccggactcagatgcaggtagctcaggcacaggcagaggaa
gccagcaacatgcggaagcgagttgatgatgaagattacatatcaaaaccatctactgca
accactacaactgatgcaaacacaaaagcagaacaaacacctaggaagtcagctgctgcc
attgcagctgaggttgcagacaagcttgcagcttctagctcatctcaactgattatgact
tctgttctttctacatttgcagctgaagaggctaagaatgctggtctaacacaggtctcc
gcaccatcaaattcactcacatccatgcccaatagttcaggctctgagtcaatggcaaaa
cctgaaaagtccatgccagtctcagatcctaaggctttcatgtcagcacagccatttacc
gtgccaccaaatcattcatatcaatcagttttggttccgcaatcagcaatgcaaaaccat
gccccaacctcgcaagctcaatatcatatacttcccaacccatcccaacagtatttacag
ccatcaggaggaatcatggccccttatggttataatagccttgtacccttaccgccagga
cccccacctcccccaccccatatggtcagcccaatggtgcctatgactttgcaagtaact
cagcagcaaacaataccgctaacacagcaacccccagcaccgcctagtttccggccactt
cagccaccaggaatggtattctatgataattcggatgcctttaatacccgtaatcaacgg
atttggtga
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