Carya illinoinensis (pecan): 122303594
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Entry
122303594 CDS
T08745
Name
(RefSeq) RHOMBOID-like protein 2
KO
K27605
rhomboid-like protein, plant [EC:
3.4.21.105
]
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cill01002
]
122303594
Enzymes [BR:
cill01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
122303594
Peptidases and inhibitors [BR:
cill01002
]
Serine peptidases
Family S54: Rhomboid family
122303594
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Gene cluster
GFIT
Motif
Pfam:
Rhomboid
DER1
SH3-A_UBE2O
Motif
Other DBs
NCBI-GeneID:
122303594
NCBI-ProteinID:
XP_042971367
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All DBs
Position
3:complement(10547605..10550908)
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AA seq
342 aa
AA seq
DB search
MRGEDLENRGRGEGGGGGGGGGGTGEVKSRSNYRTYPVSSDFYTGDDSETPWTPWLIPLV
VVANVAMFLAVMHVNNCPKHNNGLQGKCVARFLGRFSFEPIKGNPLFGPSSATLEKLGAL
EWSKVVQKHQGWRLVTCVWLHAGVIHLAANMLSLVFIGIRLEQQFGFARIGVVYLLSGFG
GSILSSLFIRNISVGASGGLFGLLGAMLSELFTNWTIYTNKAAALITLLVIIVINLGIGI
LPHVDNYAHIGGFLVGFFLGFVLFPRPQYGWSEPQNLPAGIRVKSKYKSYQYAFWLISLA
MLIVGFIVALVMLFRGENGNDHCHWCHYVTCVPTSRWNCGEK
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgcgtggtgaagatcttgaaaacaggggacgaggagaaggaggaggaggaggaggagga
ggaggaggaacaggggaagtgaaaagcagatcaaactacagaacctacccggtctcttct
gatttctatacgggagatgactcggagaccccatggaccccctggctgatccctttggtc
gtggtagcgaacgtagctatgttccttgctgtcatgcacgtgaacaattgtcccaagcac
aataatgggctgcaggggaagtgtgtggcaaggtttcttgggcgcttctcctttgaacct
atcaagggaaatcctttatttggaccctcttctgcaacattagagaagttgggggcactt
gagtggagcaaggttgtccagaagcatcaaggatggagacttgtcacttgcgtctggttg
catgctggtgttattcatctggctgcgaacatgttgagcctggtcttcattggtatacgc
ctagaacaacagtttgggtttgctcggattggagtagtttacttgttgtcaggttttggt
gggagcatactttcttctttatttatcagaaacatttctgttggtgcctccggtggcctt
tttgggcttcttggagcgatgctttctgaactttttacaaactggaccatctataccaac
aaggctgcggcgctgatcacacttctggtcatcattgtcatcaaccttggcattggaatt
ttgccacatgttgataattatgcacacatcggtgggtttctggtgggtttcttccttggc
tttgttttgtttccccgtcctcaatacgggtggtcagagcctcagaatcttcctgctgga
attcgtgtcaaatccaaatacaagtcttaccaatatgcattttggctcatttcccttgct
atgctaattgttgggtttatagttgcattggtgatgcttttccgaggagagaatgggaat
gatcattgccactggtgtcactacgtgacctgcgtccccacctctagatggaactgcggt
gaaaagtaa
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