Carya illinoinensis (pecan): 122303723
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Entry
122303723 CDS
T08745
Name
(RefSeq) probable pectate lyase 20
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00040
Pentose and glucuronate interconversions
cill01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122303723
Enzymes [BR:
cill01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
122303723
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Gene cluster
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
TMEM51
Motif
Other DBs
NCBI-GeneID:
122303723
NCBI-ProteinID:
XP_042971564
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Position
3:complement(20533027..20537084)
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AA seq
445 aa
AA seq
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MAVSLRWFSVGSLLLVLTLLFIIVMASKEKDQLVQSRFAEAEELQSSKNASMADRSKDEW
NEHAVHDPEEVASMDDLRIRNSTHRRNLGYFSCGTGNPIDDCWRCDRRWYYRRRNLANCA
IGFGRNAVGGRDGKYYVVSDPSDDDPVNPKPGTLRYAVIQDRPLWIVFKRDMVITLKQEL
IMNSFKTIDGRGANVHIAYGACITIQFITNVIIHGLHIHDCKPTGNAMVRSSPSHFGWRT
MADGDAISIFGSSHIWVDHNSLSNCADGLVDAIMGSTAITISNNHFTHHNEVMLLGHSDS
YTRDKQMQVTIAYNHFGKGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGN
RYLAPANPFAKEVTKRVYAENGAWKHWNWRSEGDLLLNGAYFIPSGGGAAASYARASSLG
SKSSSMVGAITSGAGVLTCRKGYQC
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggcggtatctctgagatggttttctgttggctcattgctgctggttctaacgctgctt
tttataatcgtgatggcctccaaagaaaaggatcaacttgtacagtcaaggtttgcagag
gcagaggagttgcagagctccaaaaatgcgtcaatggcggacaggtcaaaggatgaatgg
aatgagcacgctgtccatgatccagaggaggtagcttctatggatgatctgagaattcgc
aatagcactcataggaggaacttgggatatttttcatgtggaacagggaacccgatcgac
gactgttggcgctgtgacaggcgctggtactaccgccgcaggaacctagccaactgtgcc
attgggtttggaaggaatgcggttggcggccgtgacggcaaatactacgttgttagtgac
cccagtgatgatgaccctgttaaccctaaaccgggtacgctccgctacgcagtcattcag
gacaggcctttgtggattgtgtttaagcgggacatggtgatcacactcaagcaggagctt
attatgaacagctttaagaccattgatggtcggggtgctaatgtccacattgcttatggg
gcttgcattacgatccaattcattacaaatgttatcatccatggcctgcacatccacgat
tgcaagccgacaggcaacgccatggtccggagctcgcccagccattttgggtggaggaca
atggctgatggggatgccatttctattttcggttcgagccatatttgggttgaccacaac
tcactctctaattgtgctgatggccttgtcgatgctataatgggctccactgccattacc
atttctaacaaccacttcacccaccacaatgaggttatgctattgggtcacagtgactcc
tatacaagagataagcagatgcaggtgaccattgcctacaaccattttggtaagggacta
atccagagaatgccaaggtgtaggcatggatatttccatgtggtaaacaatgactacaca
cactgggaaatgtatgccattggtggaagtgctaatcctaccattaacagtcagggcaat
agatatcttgcacctgccaacccatttgccaaggaggtgacaaagagggtgtacgcagag
aatggtgcatggaagcactggaactggagatcagaaggagatcttctgcttaatggagcc
tacttcattccatcaggaggtggagctgcagccagctatgccagagcctcaagtttgggg
tctaagtcctcttccatggttggtgccattacttccggtgctggtgtccttacttgccgc
aagggttaccagtgttga
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