Carya illinoinensis (pecan): 122303739
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Entry
122303739 CDS
T08745
Name
(RefSeq) polygalacturonase At1g48100
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00040
Pentose and glucuronate interconversions
cill01100
Metabolic pathways
Module
cill_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122303739
Enzymes [BR:
cill01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
122303739
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
DUF1565
NosD
Motif
Other DBs
NCBI-GeneID:
122303739
NCBI-ProteinID:
XP_042971604
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Position
3:complement(3861644..3864678)
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AA seq
444 aa
AA seq
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MISNLSLKDLTLIIFIAFCVWSSSYETCCAREGKQWIRRSKTKFGHGRNQHPAGRSLLSS
AIFNVLDYGAKGDGRVDDTKAFGAAWAAACKVEASTVVVPSGSVFLVAPITFSGATCQSN
IVFQLDGKIIAPTSSKPWGSGLLQWLEFTKLKGITIKGKGIIDGQGSVWWDDSGKMPSTK
PTALRFYGSTGVTVTGITIQNSPQTHLKFDSCTTVQVYDINVSSPGDSPNTDGIHLQNTQ
DVVIYSTSLACGDDCVSIQTGSSNVYIHNVNCGPGHGISLGGLGKDNTKACVSNVTVRDV
QMHNTLTGVRIKTWQGGSGSVQGIMFSNIQVSEVKTPIMIDQFYCDKSKCKNETSAVAVS
GINYVNIRGTFTVKPVHFACSDSVPCTGVSLTTIDLEAAQGSGFSEPFCWETFGELKTTT
VPPIHCLRSGKPSRSRVQSNPDSC
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgattagtaatttgagtctgaaagaccttacattgatcatttttattgccttttgtgtc
tggtcttcaagctatgaaacttgctgcgccagagaaggcaagcaatggatcaggcgaagc
aaaactaaatttggtcatggccgcaaccagcacccagctggtcgtagtctcttgagctct
gccatcttcaatgtcttagactatggtgccaaaggcgatggacgtgtcgatgacacaaag
gcatttggagcagcgtgggcagcagcttgcaaggtggaggcatcaacagtggttgttcca
tctgggtctgttttcctcgttgcaccaatcactttttctggagctacttgtcaatcaaac
attgtctttcagttggatggaaaaatcatagcacctacaagctctaaaccttggggatca
ggtctactacaatggctagaatttacaaagctgaaagggattaccatcaaaggtaaaggt
atcattgacggacaaggttcagtctggtgggatgactcggggaaaatgccaagcaccaag
cccacggccctgaggttttatggaagcaccggagttacggtcaccggcataacaattcaa
aacagtcctcagacccacctcaaattcgatagctgcacgaccgttcaggtttacgacata
aatgtgtcatcgccgggtgacagtcccaatacagatggaatccacctgcaaaacacccaa
gatgtggtcatttacagcaccagtcttgcatgtggagatgactgtgtgtccatccaaact
ggatcctcaaatgtatacatacacaatgtcaattgtggacctggacatggaatcagcctt
ggagggcttggaaaggacaatactaaagcttgtgtgtcaaatgtcactgttcgagacgtc
caaatgcataatacgttgaccggggttcgaataaagacttggcagggaggatcgggctca
gtacaaggaatcatgttctccaacattcaagtttctgaagtcaaaactcctataatgatt
gaccaattttactgtgataagagcaaatgcaagaacgagacatcggctgtggcagtatcg
gggattaactacgtaaatattcgaggaaccttcaccgtaaaacccgtgcattttgcatgc
agtgacagcgtgccttgcactggagtctctctcactaccattgatctcgaagctgcccaa
ggaagcggtttttctgaacctttctgctgggaaacatttggagagctaaaaactacaact
gttcctccaattcactgtttgcggtcaggcaagccatcgagaagcagggttcagtctaac
cctgattcctgctga
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