Carya illinoinensis (pecan): 122303929
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Entry
122303929 CDS
T08745
Name
(RefSeq) H/ACA ribonucleoprotein complex non-core subunit NAF1
KO
K14763
H/ACA ribonucleoprotein complex non-core subunit NAF1
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cill03009
]
122303929
Ribosome biogenesis [BR:
cill03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
122303929
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gar1
IgD_del_linker
Motif
Other DBs
NCBI-GeneID:
122303929
NCBI-ProteinID:
XP_042971854
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All DBs
Position
3:complement(24942416..24947273)
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AA seq
688 aa
AA seq
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MVGFISEPSSVDDLEQAPKLKDSNNSLDPFDPTPAEFSFFDSFPDFDSIKDWFEDTTISD
MDDIGKVEFGSPEKPIELLQAQTPQGPEPIRNVSEPIAPGCEASVAGSGCGVKVEEWECE
KLGNSSYCIEEEMRKKVILGSDPGNSDLGGGNDMKSKIESDGDESGSSESESESSFSSVA
ASSTGSGDDDDEEEEEEEEEKRETKVELTRGADEAGEVEEGEIRDGDDEQEMKRGTDDDG
ENNEADGEGMVDWSDVDEGDDDDEGGATIGPIRSTHELEVLPPVPPVDVTLQPHHQMLPM
GVVLSIIGAQVIVEGVEKHNPLSEGSILWITESRTPLGLVDEIFGPVKNPYYKVRYNSDN
EVPSAIHAGSSISFVPEFANHVLNDKDLYKKGYDASGANDEEVSDEAEFSDDEKEAEYKR
IQKMTKRGINEPNVRNKKNNRKVKNRDGQWKNAQPSSRQPETRVNQLASTQNQHNFSPTA
AAAAAFSVGQGYVSGPGLVSPFPPTAQTVGFNTPLNGVWTNGNYGMPFQPPQGAVFPNGF
PTNGMTWLPQNPHQHLMPMPNRMLFQQQFDPSQRSLPTAMLPAEQSNIFLGPTFGRGLAD
QNALNQVTFGMGLQGRHTQPSMNSGERGVMSNGLEVEQSCAMQQSFFTPGNVENPQQTNL
GASSSRGRKPYRRGGGRFAGGRAGRQSK
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggtgggatttatatctgaaccctcctctgttgatgacctcgaacaagctccaaagctc
aaggattcaaacaactcacttgacccttttgaccccacacccgccgagttctcattcttt
gattctttcccagatttcgattctataaaagactggtttgaggatacaacaatctcagat
atggatgatataggaaaggttgagtttggaagtcccgagaagcccattgagcttctccaa
gcccagactccacaagggcctgagccaattcgtaatgtttctgagccaattgctcctggg
tgtgaggcaagcgttgctggctctggctgtggggtgaaggtggaggagtgggagtgtgaa
aagttagggaattcgagttattgcattgaggaagagatgaggaagaaggttattttgggt
agtgatcctgggaattcggatctgggcggtgggaatgatatgaagagtaagatagaaagt
gacggagatgagagtggaagttcggagtctgagagtgaaagttcgttttcgtcagtggca
gcttcaagtactggtagtggtgatgatgatgatgaggaggaggaggaggaggaggaggag
aaaagggaaacgaaggtggagttgacgaggggtgccgatgaggcaggtgaagttgaagaa
ggagagataagggacggtgatgatgagcaggagatgaaacgtgggactgatgacgacggt
gaaaacaatgaagctgatggagaggggatggttgattggagcgatgttgacgagggtgac
gatgacgatgaaggcggtgctacaataggacccattagatcaactcatgaacttgaggtc
ctccctcctgttcctccggtggatgtgaccctgcaaccacatcatcaaatgctacctatg
ggagttgtcttatcaattattggtgctcaagtcattgtagaaggggtcgagaagcacaat
cctcttagtgagggttctatcctctggataactgaaagcagaaccccactgggactggtg
gatgaaatatttggacctgtcaaaaacccatactataaggtaagatacaattcagataac
gaagtcccatctgcgatccatgcaggctcttcgatctcttttgtaccagagtttgccaat
catgtgctcaatgacaaggatctttacaagaaaggttatgatgcatctggtgcaaatgat
gaagaggtgtcggatgaggcagagttttctgacgatgagaaagaggccgagtacaagaga
atacaaaaaatgacgaagaggggcataaatgaaccgaatgttagaaacaagaaaaacaat
agaaaggtcaaaaatagggatgggcaatggaaaaatgctcaaccatcatcacgtcaacca
gaaacacgtgtcaatcagctagcatccactcaaaaccagcataatttctcacctactgct
gctgctgctgctgcattttctgtaggacaaggttatgttagtggacctggcctagtttca
ccatttcccccaacagcacagacagttggttttaacacaccactaaatggagtttggaca
aatgggaattatggaatgccgtttcagccaccacagggtgcagtctttcctaatggattc
ccaactaatggtatgacctggctcccacagaatcctcaccagcatctgatgcctatgcca
aacagaatgctgtttcagcagcagtttgatcctagtcagaggtcacttcctactgcaatg
ttaccagctgaacagtcaaatatatttcttggacccacatttggacgtggtcttgcggat
cagaatgccttaaatcaagtgacatttgggatgggtttacagggccgccatacgcaacca
tcaatgaatagtggagaacgaggagtcatgtctaatgggctggaagtggaacaaagctgt
gctatgcaacaatcctttttcactccaggcaatgttgaaaatccccagcaaactaatctg
ggtgcgtcttcaagtcgtggaaggaaaccatatcgtcgtgggggtggtcgttttgcaggt
gggagagctgggcggcagtcaaaatga
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