Carya illinoinensis (pecan): 122303998
Help
Entry
122303998 CDS
T08745
Name
(RefSeq) two pore calcium channel protein 1A-like isoform X1
KO
K16900
two pore calcium channel protein, plant
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cill04040
]
122303998
Ion channels [BR:
cill04040
]
Voltage-gated cation channels
Calcium channel, two-pore (TPC)
122303998
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
EF-hand_7
EF-hand_6
EF-hand_1
Motif
Other DBs
NCBI-GeneID:
122303998
NCBI-ProteinID:
XP_042971938
LinkDB
All DBs
Position
3:27154600..27202505
Genome browser
AA seq
734 aa
AA seq
DB search
METTLLSGENSGTVNRRREPSTRSHAIAHGSPYEKAAALVDLAEDGIGLPEQILDQSNFQ
NAAKFYFIFTRLDFIWFLNYFALIILNFLEKPLWCTNYFKYSCNNREYFYLGQLPYLTGA
ASLIYEATTLIILIVHTFFPLSFEGYHLYWKSPLNRVKVACLLLLVADILVYALCWSLEA
YDFPSFRISPYIRVVFFMLNFRELRATIIILAGMLGTFLNILALGLLFLLFSSWLAFVMF
EDTQQGKTVFTSYGTTLYQMFVLFTTANNPDVWIPAYKASRWYCLFFVLYMLLGVYFVTS
LILAVVYDSFKSQLVKQVSEMDSTRRRVLGKAFNLIDKHNRGFIDKEQCVQLFQELNKYR
TLPNISAEEFELIFDELDDSQDFKINSDEFADLCNAIALKFRKEESISYFEKCPFYHSPF
SEKLKSYVRSPIFGYIVSFILVLNLLAVIVETTLDIENNSAQKVWQEVEFVFGWIYVFEM
ALKVYSFGFENYWRDGQNRFDFLITWVIVIGETLTFVTPDGLAFFSNGEWIRYLLLARML
RLIRLLMYVQRYRAFIATFITLIPSLMPYLGTIFCVLCIYCSLGVQIFGGIVNDGNASLE
GTELADDDYLLFNFNDYPNGMVTLFNLLVLGNWQIWMQSYKELTGTSWTLAYFVSFYLIT
VLLLLNLIIAFVLEAFFAETDLELSENCNEQDKEVDGGKGRRRSVGTKSRSQRVDALLHH
MLSAELEQPESSNP
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggagacgactctgctcagtggagaaaacagtgggactgtcaatcgccggagagagccg
tctactcggtctcatgctattgctcacggctcgccttatgaaaaggctgccgcactggtt
gatctggctgaagatggaattggtctacctgaacaaattcttgatcaatcaaacttccag
aatgctgcaaaattctacttcatatttactcggcttgatttcatttggttccttaattat
tttgcattaataatcctaaatttcttagagaaacctttatggtgtaccaactatttcaag
tattcttgcaacaatagggagtacttttatcttgggcagttgccctacttaactggtgcg
gcgtctcttatatatgaggccacaactctcatcatactcatcgtacatactttctttcca
ttatcatttgaaggttaccatctctattggaaaagtccccttaatcgagtaaaggtggct
tgcttgttactcttggttgctgatatattggtttatgccctctgctggtctctcgaagcc
tatgattttccttcttttagaatctcaccatatatcagagtcgtgtttttcatgctgaac
tttagggaattaagagcaaccatcataatcctggctggaatgcttggcacattcttaaat
atcttggctttaggtctattgtttcttctgttttcgagttggttagcctttgtaatgttt
gaagatacccaacagggaaagacagtatttacttcatatggcactactctgtatcagatg
tttgttctgttcaccacagccaacaatccagatgtctggattcctgcatacaaggcttcg
cgttggtattgtctgttttttgttctctatatgctattgggggtttactttgtcaccagc
ttgatccttgctgtcgtatatgacagcttcaaaagtcagcttgtgaaacaagtttctgag
atggattctacgaggaggcgtgtattggggaaagcattcaatctcatagataaacataat
cgtggatttattgacaaagagcaatgtgttcaactgtttcaggaactaaataagtacagg
actttgcctaatatatcagcggaagaatttgaattgatttttgatgagctggatgatagt
caagacttcaagatcaactcggatgaatttgctgacctttgcaatgccattgctctaaaa
ttccggaaggaagaatctatatcttactttgaaaaatgtccattctaccattcacccttc
tctgaaaaattgaaaagctatgtacggagtcccatatttggttacattgtatccttcatt
cttgtgctgaatctgttggctgttattgttgaaacaacgcttgatattgaaaacaattct
gctcaaaaggtgtggcaagaggttgagtttgtctttgggtggatatatgtattcgaaatg
gctctaaaagtctattcatttggatttgaaaattattggagggatggtcaaaaccgtttt
gattttctcatcacatgggtaatagttattggagaaaccttaacttttgtgacccctgat
ggactagcatttttttccaatggagaatggattcgctaccttctccttgcaagaatgtta
aggttgataaggctactgatgtatgttcagcgttaccgtgccttcattgccactttcata
acccttataccaagcttgatgccataccttgggaccatattttgtgtcctttgtatttat
tgttctcttggtgtgcagatctttggtggaattgtcaatgatggaaatgccagtttggaa
ggaacagaacttgctgatgacgattatttactgttcaatttcaacgactatccaaatggg
atggtgacactttttaatctactagttttgggaaattggcaaatatggatgcagagctac
aaggaattaaccggaacgtcatggacactcgcttattttgtcagcttttacttaataaca
gtgttactgctcttgaatttgattatagcttttgtcttggaggcattctttgctgaaacg
gatcttgagttatcagaaaactgtaatgagcaggacaaggaagtggatggaggaaagggg
cgccgacgatctgtgggcacaaaatcacgaagccaaagggttgatgctcttcttcatcat
atgttgagtgcagagctcgaacaacctgagtcttctaatccatag
DBGET
integrated database retrieval system
