Carya illinoinensis (pecan): 122304172
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Entry
122304172 CDS
T08745
Name
(RefSeq) peroxisome biogenesis protein 6
KO
K13339
peroxin-6
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
122304172
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cill04131
]
122304172
Membrane trafficking [BR:
cill04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
122304172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_16
AAA_lid_3
AAA_5
Rad17
AAA_22
RuvB_N
AAA_18
AAA_17
nSTAND3
DUF815
TsaE
AAA_28
Vps4_C
RNA_helicase
NPHP3_N
TIP49
AAA_7
AAA_33
AAA_14
Parvo_NS1
ATPase
AAA_25
Cytidylate_kin2
Mg_chelatase
IstB_IS21
PEX6_4th
AAA_2
PhoH
AAA_24
MCM
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
122304172
NCBI-ProteinID:
XP_042972197
LinkDB
All DBs
Position
3:37521999..37533622
Genome browser
AA seq
920 aa
AA seq
DB search
MVERRKPLVLSSTKFLIHSICSSRLSEGDQVLVTAEDKLLKDNEPGGFLLRAGILTFSRN
NEHILDPKLVSLDNAALVGLSTSALKRLSITSGSLVLIKNIETNVQRIAQAVVLDPPGTQ
VSPDFRLSTYCIMLVFPSVTFSQNRCLPLDDEVAYLSPLLAFNLDLHISCLKSLVYRGQE
ALASYFQAKVDEDLSREGIEGSVISVGLKPLDQFPRYASHLRASFVKIPECGILESLKGS
SSIEAEDRQDMIDLALQNYFEVDRYLARGDIFRIYINWKCNSITCIPCNQKSQDSGDNII
YFKVVAMEPSEEQLLRVNSTQTALVLGGSVPSAVPPDLLIAGPKSFAPLQGDTVKVLASV
LTPALCPSSLSSKFRVSVLLSGLAGCGKRTVVKYVSRRLGLHVVEYSCRSLMASERKASV
ALAQAFNTAQRYLPTILLLRHFDVFRDLGSHEGSPNDQLGVTSEVASVIRKYTEPINEDD
DTNTKGEPNGDFHMKVLLVAAADSSEGLPPTIRRCFSHEISMGPLTEEQRVEMLSQSLQS
LSKLLPNAGSEDFIKEIAGQTSGFMPRDMHALIADAGVNLIPRVNVPHQKVEPKEVDSNP
EVVPQDLGKEDLTKALERSKKRNASALGTPKVPNVKWEDVGGLEDVKKSILDTVQLPLLH
KDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVR
DIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSTQDLFII
GASNRPDLIDPALLRPGRFDKLLYVGVNSDASYRERVLKALTRKFQLHQDVSLYSIAKKC
PPNFTGADMYALCADAWFHAAKRKVLGVDSDSSHTDDQADSVVVEYNDFVKVLEDLSPSI
SAAELKRYELLRSQFEGASK
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atggtagagaggaggaagcctctggtgctatcgtccaccaaattccttattcattccata
tgttcgtcacgactcagtgaaggagaccaagtcttggtcactgctgaggacaagctgctc
aaggataacgagcctgggggcttcttgttgcgggcagggattctcacattctcgaggaac
aatgaacacattttggaccccaaattggtttctctcgacaacgctgctttggtcgggctc
tccacctctgctcttaaacgactgtcgataacttcgggctcgctggtgctcatcaagaat
atcgagacaaatgtgcaaagaattgcccaggctgttgttctcgatcctccaggaacgcaa
gtgtcacctgattttagattatccacatactgtataatgcttgtattcccttcggttacc
ttctctcaaaatcgttgtctgccactggatgatgaagttgcctatctgtctccacttttg
gcattcaatcttgacttgcacatatcatgcttgaaatctcttgtttacagagggcaagaa
gctttagcgtcgtacttccaagctaaagtagacgaggatttgtctagggaggggattgag
ggttctgtgattagtgtagggttgaagccattggatcagtttcctagatatgcttcacac
ttgagggcttcttttgtgaagataccagaatgtggtatccttgaatctctcaaaggaagt
tcatctattgaagctgaagatcgtcaagatatgattgatttggcactgcagaactacttt
gaagtggatagatatctggcaagaggtgatattttcagaatttacataaattggaaatgt
aattcaataacgtgcattccttgcaaccagaagtcacaagatagtggtgataacattatc
tacttcaaggttgtggccatggaaccatcagaggaacaacttcttcgagtcaatagcacc
caaactgcccttgtgcttggggggagtgttccttctgctgttcccccagatttgttaatt
gctggaccaaaaagttttgctcctttgcaaggggacactgtgaaagttttggcctctgtt
cttacaccagctctttgcccatcatctctgtcttctaagttcagagtttctgttctttta
tctggattggcaggatgtggaaagaggaccgtggtcaaatatgtttctcgtcgattgggc
ctgcatgtggtggaatatagctgtcgaagtctaatggcatctgagagaaaagcttcggtt
gctctagctcaagctttcaacacagcccaaagatacttgcccacaattcttcttctccgc
cattttgatgttttccgagatttaggctctcatgagggttcgccaaatgatcaattaggt
gtcacttcagaagttgcatcagttattcgaaaatacaccgagccaatcaatgaggatgac
gacactaatactaaaggagaacctaatggtgattttcatatgaaggtgttgctagttgca
gctgctgacagttctgaaggtctaccaccaactataaggcgttgcttcagtcacgaaatt
agtatgggtcctttgacggaggaacaaagggttgaaatgctgtcccagtcgctgcaaagc
ctttccaagcttctgccaaatgctggctcagaggattttatcaaggaaattgctgggcag
acatctggtttcatgcccagggatatgcacgctttgattgctgatgctggtgtaaactta
attcccagggtcaatgttccacatcaaaaggttgagcccaaggaagtagatagtaaccct
gaagttgtgcctcaagatttgggtaaagaagacctgactaaagcattagaacgatcaaag
aaaaggaatgcatcagcattgggcactccaaaggttccgaatgtgaagtgggaagatgtt
ggtgggctagaggatgtgaagaaatcaatattggatactgttcagttacctctgctgcac
aaggatttattctcatctgggttgcgtaagcgatctggtgttcttctgtatggtcctcct
ggaacagggaaaactttgttggcgaaggctgttgcaactgagtgttccctaaactttctc
agtgtaaaagggcctgagctgatcaacatgtatattggagaatccgagaaaaatgttcga
gacattttccagaaggcaagatcagcacgcccatgtgttatcttctttgacgagcttgat
tctcttgctccagctcgaggggcctctggagattctgggggtgtaatggacagagtggtt
tctcagatgcttgcagagatcgatggcctaaatgattcaacacaggacctgtttataata
ggggcaagcaacagaccagatctaattgacccagcacttctacggcctggcagatttgat
aagctgctttatgtgggagttaattctgatgcatcttatcgggagcgggtcctcaaagca
cttacacgaaagtttcaattgcatcaagatgtatcactttactcgatagcaaagaaatgc
cccccaaacttcacgggagcagacatgtatgctttatgtgcagatgcttggtttcatgct
gcaaaacgcaaggttttgggtgtcgattcagattcttctcacactgatgatcaagcagac
tctgttgttgtcgaatacaatgattttgtgaaggtcttagaagatctttctccttcaatc
tccgcagctgagcttaagagatacgagttgctacggtctcagtttgaaggagcctcgaaa
tga
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