Carya illinoinensis (pecan): 122304219
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Entry
122304219 CDS
T08745
Name
(RefSeq) DNA repair protein RAD51 homolog
KO
K04482
DNA repair protein RAD51
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03440
Homologous recombination
cill03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
122304219
03460 Fanconi anemia pathway
122304219
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cill04131
]
122304219
04121 Ubiquitin system [BR:
cill04121
]
122304219
03400 DNA repair and recombination proteins [BR:
cill03400
]
122304219
Membrane trafficking [BR:
cill04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
122304219
Ubiquitin system [BR:
cill04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
122304219
DNA repair and recombination proteins [BR:
cill03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
122304219
RecA family proteins
122304219
FA (Fanconi anemia) pathway
Other FA pathway factors
122304219
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad51
RecA
AAA_25
HHH_5
ATPase
AAA_22
DnaB_C
Motif
Other DBs
NCBI-GeneID:
122304219
NCBI-ProteinID:
XP_042972270
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All DBs
Position
3:39882073..39885567
Genome browser
AA seq
342 aa
AA seq
DB search
MEQQRNQKMAQAQQNDEVEEIQHGPFPVEQLQASGIASIDIKKLRDAGLCTVESVAYSPR
KDLLQIKGISEAKVDKIVEAASKLIPLGFTSASQLHAQRLEIIQITSGSRELDKILEGGI
ETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADR
FGLNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGE
LSARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHAST
TRLALRKGRAEERICKVISSPCLAEAEARFQISAEGVTDVKD
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggagcagcaaaggaatcagaagatggcacaagcacaacaaaacgacgaagtagaagag
atacagcatgggccattccctgttgaacagcttcaggcgtcgggcattgcttccattgat
attaagaagctcagagatgcgggtctttgcactgtcgagtctgttgcatactctcctcgg
aaggatctcctgcaaatcaaaggaatcagcgaagctaaagttgacaagatcgttgaagca
gcttccaagctaatccctctgggttttactagtgctagccaacttcatgcccaaaggctt
gaaattattcaaataacatccggatcaagagaacttgacaagatcttggaaggaggaatc
gagacaggatctattactgagatatatggtgagttccgttctggaaagactcagctgtgt
cacacgctctgtgtcacttgccaacttccgttagatcaaggaggtggtgaaggaaaggca
atgtacatcgatgcagagggcacattcaggccacagagactcttacagatagcagacaga
tttggactaaatggtgctgatgtcttggagaatgtggcctatgctagggcatataacact
gatcatcagtcgaggcttttgcttgaagcagcttcaatgatggtggaaacaaggtttgct
cttatgatagtagacagtgctactgctctctacagaacagatttctctggaaggggagaa
ctttctgcccggcaaatgcatcttgcaaagtttctccggagccttcaaaagttagcagat
gagtttggtgtggctgttgttatcacaaaccaagtggttgcacaagtggatggttcagca
atctttgctgggcctcaaatcaagcctattggtggtaacattatggcgcatgcttccaca
acaaggcttgctctgcggaagggaagggcagaggagcgcatctgtaaagtaataagctct
ccttgtttggcggaagctgaagcacggtttcagatttctgcagaaggtgtaactgatgtc
aaggactga
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